Ll_transcript_420366

• Id Trinity: TRINITY_DN48775_c1_g1_i21
• Name Transcript: Ll_transcript_420366
• Sequence: CTTAAATGTAAACACCCATCCACTTTGCCCGCTCTCTTTCATTTCCCTCTCACGCTTTTCTCCGTTAGGTTTTCAGATTAGGGCCACAGAGTATATACAC TATTACTCATTCATAATCATTGTATGTAACTGTGAAACAATTGTAATGGCGAATCCATTTGAATTTCAATTATACGAATACAACGATAACGTGGTCGAAA GTTTAGCTCCAGCACCGTTTGTAATCTCCGACGACGATGAAGAAGAAGACGAAGACGAAGATGATGATGAAGAATACGTCGCCGTTTTACCATCTACTAG GGTTTCGGAAAATTGCGAGGAAGAAGAACGGAACAAGCGGCGTAGAACGGAAGCAGGAGAAGCTTCGTCTTCATCAACCGCATTTGAGAGTAGCCAAGGG AATGAGTGGAGTCGCAACGAGATTGATGGACTACTCTGTCCTATTTGCATGGAACCTTGGGTCAACAATGGCGAACACCATATATGCTGTCTTCCTTGTG GACACATATATGGTATGTCTTGCATCAAAAAATGGCTTCAGCAGCGAAAAAAGCACGGCAAGTGTCCTCAATGCAATAGGAAATGTTCCTTGAAGGATGT GAGGAAACTCTATGCTTCACGATTAGTTGCTGTTGATGAAGAATCTCAGAAGAGGATTCAATCACTTGAGGCCAAATGTGCAGCCCTTGAAAGTAAGGGT GATGATTGGCGCAAGAAAGAAGCTGGATGGCAGAAGAGAAAAGCTGCATTACATCTTCAAGTTCAGAAGCTTGCAGAGAAAAACATTTATTTGGAGCAGC TGCTATTAGATATGCAGAGCAGGCAATCTGGAATTAGGAACAACGGCTCAAGCTTCTATGGAAAGGGATCCTTCTGCAATTTCGAATTGCAGAAAACATT TCAACTGAGTGGTGCACGGGTATTTGATATGGACACATCGAAGCAAATTATATTAGTTGCACAAAAGCCAAAGGTGATAGGTGGAATGCACTCACTAACT AAAGTAAGCTTGATAGCTCCATTTGAGACAGAAGATATCTTACTGCCTTCCACTATAAATGGTATTAGAGATGTACATATTTCACCTTCTAATGGTAGCC TGGCCCTCTATGCTTCAGTAGGAAAGAAATTATCAGTGCTAAGCATGGAGAGCAACAATCCTGTTGTAAATTATGATCTACAGTGTCCTGCTTGGTCATG TTCATGGGATCTCAACAGTTCACATTACTTATATGCTGGACTACAGAATGGTTGTGTCTCTGTGTTTGATATGCGCCAAACTGCAGGACCTGTAAAATCT TTATTTGGGTTGACTAGCAACCCTGTTCATACTTTAAAACCACTTGCACAAACTTCAAGTCTTTCATCTGGTGGTAGGACCATCCTATCCGCAGCTGCCA TTGGAGTTTCTCAGTGGAACTTTGATTCTGAAGAAGGGCCGTCTCTTGTTCCTAATACTGTTAGTCAAGGAGTTTGTATATCCCTTGCCTATTGCCCTAG CAGTGATGACGTTGTTGTTTCATATCGTCCAAAAGTTGACACGTCAATGGAAGTGCCTCTTTCTCAACAATTGCTCAGTCCTCTAGGTACTGGACAAGGA GTACAGGGCTCTCATGTATTGTTCAAGAGAGATGATAGTCACAATTTCCAAATGATGGGTTCCTCATGCGCCAATGTAAGTAAAATTAGACTACCAAAAT GTGTGATTATAGAGTTAGGGGATCAGAGAAGATTGTTTGCTTGTGGAGATGAAGTTACCGGTGAACTGGTCTTGCATGAGTTGCCATCTTTTAGAGTGCT TCAGCAATTCAAATTACCTGCTCACGCCCGTGATATCAAGTACTCACCTAGCCATGGAATACTTGGTTGTTTAAGTGAGAACACATTGCAGCTTTTCCAT TCCAAGTGAGGAAGCGCTTAGTGGTGGATATAATGATTAATGCCCTTTGCATAAACGAAGCCCAAAGGAAGTTGAGTTTCTTGTCCCTACTTATGCATCA TCCATCAGTGCTGGAAGGCTAACGTCTTCTTTGTTGCAAGTCGAGGACTCATCCTCCAACCAAAAACACTGTTAACAACCGGTACCATGATTTTTTTAAG CAATAT
• Tissue: pods
• Gene name: LI_gene_163890;
• Additional information: details;

Expression of Ll_transcript_420366

FPKM

• PAB: 0
• PNAB: 2.2
• PS1: 2.4
• PS2: 0.9
• PS3: 1.4
• PW1: 0
• PW2: 0.5
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_420366

• Blastp: E3 ubiquitin-protein ligase RFWD3 from Homo with 29.11% of identity
• Blastx: E3 ubiquitin-protein ligase RFWD3 from Homo with 27.38% of identity
• Eggnog: ring finger and WD repeat domain 3(ENOG410XPPE)
• Kegg: Link to kegg annotations (55159)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019424666.1)
• Pfam: Ring finger domain (PF13639.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;