Ll_transcript_420345

• Id Trinity: TRINITY_DN48775_c1_g1_i3
• Name Transcript: Ll_transcript_420345
• Sequence: CTCAAAGAAAATACACTCAACGACAACTCACATTATCCTATCCTAATTCACCCAAGCTTATCATCAATCAAAAAGAAAAACAATACTACATTCTGAGAAG ACCATTGTTCTTCATTCATTTTCCATGGCTTGCGGCCTACATTCCCCCATGGTCTCCTTTTTCCCCCACCCATAACAATAAACACATTTCACATATTCAA CACAACCCTCACCACAATTCACAATAAACATCTTCACATATTCATCACCAAACATTCACATGTCACCACCTTCACATATTCATCATCGCATCTTCACTCT TGCTACAGAGCTTGCCACCGCACCTCTTCCACCTCCAATGGTGCCACCATCGTGAATGGTCGTGGTGGAGAGTAGGGACGAAGCCGTCACCTGAGCTCCA CGCCCCATCAGCCTTGGGTTGTCGCTCCGCTCCGGGTTGGCCATCAGCGGGTGACCCGAACCAAGCGGGTGTGAGTGTGGAGAATGCGGAATCACATAAT GGAAACCTTATAAAACATGTTAATTCAGCTGTCTTCCTTGTGGACACATATATGGTATGTCTTGCATCAAAAAATGGCTTCAGCAGCGAAAAAAGCACGG CAAGTGTCCTCAATGCAATAGGAAATGTTCCTTGAAGGATGTGAGGAAACTCTATGCTTCACGATTAGTTGCTGTTGATGAAGAATCTCAGAAGAGGATT CAATCACTTGAGGCCAAATGTGCAGCCCTTGAAAGTAAGGGTGATGATTGGCGCAAGAAAGAAGCTGGATGGCAGAAGAGAAAAGCTGCATTACATCTTC AAGTTCAGAAGCTTGCAGAGAAAAACATTTATTTGGAGCAGCTGCTATTAGATATGCAGAGCAGGCAATCTGGAATTAGGAACAACGGCTCAAGCTTCTA TGGAAAGGGATCCTTCTGCAATTTCGAATTGCAGAAAACATTTCAACTGAGTGGTGCACGGGTATTTGATATGGACACATCGAAGCAAATTATATTAGTT GCACAAAAGCCAAAGGTGATAGGTGGAATGCACTCACTAACTAAAGTAAGCTTGATAGCTCCATTTGAGACAGAAGATATCTTACTGCCTTCCACTATAA ATGGTATTAGAGATGTACATATTTCACCTTCTAATGGTAGCCTGGCCCTCTATGCTTCAGTAGGAAAGAAATTATCAGTGCTAAGCATGGAGAGCAACAA TCCTGTTGTAAATTATGATCTACAGTGTCCTGCTTGGTCATGTTCATGGGATCTCAACAGTTCACATTACTTATATGCTGGACTACAGAATGGTTGTGTC TCTGTGTTTGATATGCGCCAAACTGCAGGACCTGTAAAATCTTTATTTGGGTTGACTAGCAACCCTGTTCATACTTTAAAACCACTTGCACAAACTTCAA GTCTTTCATCTGGTGGTAGGACCATCCTATCCGCAGCTGCCATTGGAGTTTCTCAGTGGAACTTTGATTCTGAAGAAGGGCCGTCTCTTGTTCCTAATAC TGTTAGTCAAGGAGTTTGTATATCCCTTGCCTATTGCCCTAGCAGTGATGACGTTGTTGTTTCATATCGTCCAAAAGTTGACACGTCAATGGAAGTGCCT CTTTCTCAACAATTGCTCAGTCCTCTAGGTACTGGACAAGGAGTACAGGGCTCTCATGTATTGTTCAAGAGAGATGATAGTCACAATTTCCAAATGATGG GTTCCTCATGCGCCAATGTAAGTAAAATTAGACTACCAAAATGTGTGATTATAGAGTTAGGGGATCAGAGAAGATTGTTTGCTTGTGGAGATGAAGTTAC CGGTGAACTGGTCTTGCATGAGTTGCCATCTTTTAGAGTGCTTCAGCAATTCAAATTACCTGCTCACGCCCGTGATATCAAGTACTCACCTAGCCATGGA ATACTTGGTTGTTTAAGTGAGAACACATTGCAGCTTTTCCATTCCAAGTGAGGAAGCGCTTAGTGGTGGATATAATGATTAATGCCCTTTGCATAAACGA AGCCCAAAGGAAGTTGAGTTTCTTGTCCCTACTTATGCATCATCCATCAGTGCTGGAAGGCTAACGTCTTCTTTGTTGCAAGTCGAGGACTCATCCTCCA ACCAAAAACACTGTTAACAACCGGTACCATGATTTTTTTAAGCAATAT
• Tissue: pods
• Gene name: LI_gene_163890;
• Additional information: details;

Expression of Ll_transcript_420345

FPKM

• PAB: 0.3
• PNAB: 0
• PS1: 0
• PS2: 0
• PS3: 0
• PW1: 0.3
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_420345

• Blastp: E3 ubiquitin-protein ligase RFWD3 from Homo with 26.12% of identity
• Blastx: E3 ubiquitin-protein ligase RFWD3 from Homo with 26.67% of identity
• Eggnog: ring finger and WD repeat domain 3(ENOG410XPPE)
• Kegg: Link to kegg annotations (55159)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019424666.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;