| Id Trinity | TRINITY_DN48797_c0_g1_i18 |
|---|---|
| Name Transcript | Ll_transcript_420089 |
| Sequence | ATTGAGACTAATTTTATAAATATATTTGATAACAAAACATTTCTCTTTAGTATTCTCTAAAAAAAACCAATTGTATGATGTTATTTATAGGTAAAAAAAC TAATTATTTTCTAATATTAAACCCGGAGATCTAGCTAGAAAGGGAGGCAACGGAAAAGAAGTTATTGGGCATTTCCCGATGGCGATCCTGTACGCCTTGG TGGCAAGAGGCTCGGTGGTTCTTGCCGAGTTCAGCGCCGTCACCGGAAACACAGGCGCCGTGGCTCGCCGCTTACTCGACAACCTTCCGGCGGAGGCCGA CTCCAGACTCTGTTTCTCTCAGGATCGCTACATATTTCACATACTCCGATCCGATGGCCTCACTTACCTCTGTATGGCCAACGATTCTTTTGGCAGAGGG ATCCCTTTTTCATACTTGGAAGATGTCCAAATGAGGTTTATGAAGAACTATGGCAAAGTGGCCAATTATGCACCAGCTTATGCAATGAATGATGAGTTTT CAAGGGTTTTGCATCACCAAATGGAGTTTTTCTCTAGTAATTCTAGTGCTGACACCCTCAATCGTGTGAGGGGTGAAGTTGGTGAGGCAAGTGCATTTCA AAGAAAACTTTGTCCCTCCATATTTTGTCTTTCTCATGTATCCTCATCATTTTATTTATCTAGCACACGGTGTGAAGTGAGAACAGAATACTGTATAAGC TAATCAAGTTTCATGATATGATAGGTAAAGTTGTGCTCTGGTTTAAATAATATGCAACCCGATTTCTGTTGCCAATTCTCTTCTTCCTGCTTGTTCTGAT GTTAGTTATTGATTGGAAGTGATAGATAACTTCATTTAAGCATATGATCTGGTTTATACAACGAAAACAACCAATCTGGTTTATGAGGCCAAAGAGAAAC ACAAATGTTATAATACAATTTCCATATATTTGATTTCTGCCCCTCAGTTTGTACTTTCAGAAAAAAATGAATGTGGGATGAGTTATTATAGGATTTATCT GATATAAAGTTGGTAACCTAAGCAAAAATGGCACCTTTTACTTGAATTTCTGGTGCCTTTACAAGGAGCATGGCTCATGCCAAGGAGTGGAGATCAAATT GGATTTCAAGTTTTATGAAGCTGTAATATGTTCTTTTTACTGCTTATTGTACTATCATGCATTTGTGATTTTTGAAGTCTCTTCACTTGGTGACATTAGA ACTTCCAATCTGTCATACAGATACGAACTATCATGGTGGATAATATTGAGAAAATATTGGAGAGAGGTGACCGGATTGAACTTCTTGTTGATAAGACATC AACAATGCAAGATAGTGCATTTCACTTTAGGAAGCAGTCAAAGCGCCTTCGAAGAGCTCTTTGGATGAAAAATTTCAAACTCCTGGTGCTATTGACTGTC TTGATCGTTCTCTTTCTTTACCTTATAATTGCTGCTTGTTGTGGAGGCATCACTCTACCATCCTGTAGATCCTAACTGACCACTGTGGTTGGTTTATATA TCTTATGATCTCTGCAATTATCAAGATGATTCCTCTCAATATGTACTTCACTATTCCATGTTCAGAACAATTAGCTGAGTGGGAATCTGATAAAGGGTTT TGAAACAGTGACATGTATTTTCTTTTTCTGTCGTTCTTGGTTTTGTATCATAAAATTACGGGGCATCCTTCTGTAAATGGATTCTTTTACCATCTTTTGT TATCTAGTTTTACCATTTTTCATTTAGTTTAATGCATTTTACTTTTATACAGCTATATGACCTTTTTTATGCTTTGTTTTTTTCAAAATAAAGATATATA TAGTTTTCTGTTTTAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_164018; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_420089
| Blastp | Vesicle-associated membrane protein 714 from Arabidopsis with 81.75% of identity |
|---|---|
| Blastx | Vesicle-associated membrane protein 714 from Arabidopsis with 81.75% of identity |
| Eggnog | Vesicle-associated membrane protein(COG5143) |
| Kegg | Link to kegg annotations (AT5G22360) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019453853.1) |
| Pfam | Regulated-SNARE-like domain (PF13774.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |