| Id Trinity | TRINITY_DN48817_c0_g1_i11 |
|---|---|
| Name Transcript | Ll_transcript_286262 |
| Sequence | ATAAACACCGTTCTAAATAAACGGTTTCCCCTCTGCTTTTCTCACTTCAAACTTAAAACCCCAACGCTTCAATTTCATTCTCGCGTTTTCGCTCAGATTC TCCATTTTATTTTTTCCGATTAGGTGAGGCCATTCGAGTTCGTTAGATCTATAATTTTGTCGCATTTGAAAGAGTTTAAGAGAAAATGAAGAACGTTGAG CGAATCGCCAATTTTGCTTTAGCAGGTTTAACCCTAGCACCGCTTGTTGTCAAAGTAGATCCAAATGTAAATGTTATTTTGACGGCCAGCTTGACTGTGC TTGTGGGCTCTTACCGTTCGGTCAAACCAACCCCACCAGCTGAGACAATGTCCAAAGAACATGCCATGCGCTTTCCCTTTGTTGGGAGTGCAATGCTGTT TTCACTTTTTTTGCTCTTCAAGTTTGTGTCTAAGGACTTGGTGAACACTGTATTGACGGCCTACTTCTTTGTACTTGGGATTGTTGCACTTTCGGCTACA TTGTTACCATCAATCAAACATTTGCTGCCAAATCATTGGAATGAGAACCCCACAATCTGGCGTTTTTCATATTTCAGTTGTACGTGATGTGCTCCCTCCT TATTTTCCCTTACTGTTGCTGACATTGACAATAATCTTTCTCTGAACCATAGTATCAGAAGTTGTCTACTTCTACCTGTCAATTAATTAGTCAATGATGA CTGTCTTTGGCTAGTATTATTTGTTATTCATTACTGTTGGTAACTGCTACTGGTTTTGTGATGTACCCAGTGAAATACCAAAACTGTTAGTTTTCTTTAT TTATTGTTTACAGATTATACCGTCTTCATTTAAAATGTATATTTTGTATTTGATATATCTCTGTTTTAACCTGGCTTTAGTGGTCTTAATTAATTAACAC TTTTGGGTTATTAATGGGATATCTTTGCCAACACATCCGATTTCCCACAGTGCATCCCATTTTCCACTGTGCATTGGTGCTTGAAATATTGTGTACCCAT GTTCTTACACACATATATTGGTAGTAGTATTGTGTTCTGAACTTCTGTCGTCATCTTATGAGTTTCAACTCAATTTTGCCCAAAATGAGATAACACTGTT GTCTACTTGGAACTGAATGATCTATTGCTCTTACTTTTCATAAGTGCTAGCTATTTTGTTACCAAACTTCAGCTCTTGAAAAGTACATTATGGTATTTTT TTTACTCTCTTCCTGTATATGCAATCATGCAAGGGAGGTTGAATTATTATTTATACAAATGCAAACAATTTCACTTTATTTATTGAATTGCATTTGCCAT TTCATGAAACCTAATTCATTGGCTTCATTATTTTTCCTTTAATTTTTAATGCTACTTGTACAATGTTATCATATTTTGGGTTCCAGTTTTCTTACATGAA CTTTGAACTGTTTTTTAGAGAAGGGATAAGAAATATTACCAAGTGAATAACACAGGAAAATACTAAATGCACTTTGACCTGATGATTTCCACATAGCTTG TCATAATTGGAATTGTAGCCATTTCTGTTTTGCTTTAAAATGGTCGGTAAAAATGGTTGGCCGGTTGGCTGTTGTTCAGTTGTTCTGGCCACAATTATTG ATTTTTGGTTTGAATTCACCTTTTTACAGGATGAGTATATATGTTGTTGGTTTCATTATACTTGACTTATTATCACGATATGATCATTGTTGTGGTGTTT TGCTTTTTAGCTGTTTGCATTTGATCCAGTTGACATTATCTTGCTCCTATCATGTAGAATGATATTTTCTTGCACTTTTCTTATGCAGCATTGGAGATTG AGTTTACAAAGTCACAGCTCGTGGCAGCAATCCCTGGGGCCTTTTTTTGTGCCTGGTATGCTTTGCAGAAGCATTGGCTGGCGAATAACATATTAGGTCT TGCTTTCTGTATTCAGGGAATTGAAATGCTTTCTCTTGGGTCTTTCAAGACTGGTGCTATTCTCTTGGGTGGTCTATTTGTGTACGACATTTTCTGGGTT TTCTGCACTCCTGTGATGGTCAGCGTTGCAAAATCATTTGACGCTCCCATAAAGCTTTTGTTCCCCACATCAGTTTCTGCAAGGCCATTTTCAATGCTTG GACTGGGTGATATTGTTATCCCTGGTATTTTTGTCGCATTGGCTTTGCGGTTTGATGTGTCTAGAGGAAAAAAGGCTCAGTACTTCAAGAGTGCATTTTT AGGATACACTGTCGGGTTGGTCCTTACCATCGTTGTGATGAACTGGTTTAAGGCTGCACAGCCTGCTCTTCTGTATATCGTACCGTCTGTAATTGGATTT CTAGCTGCTCATTGCTTATGGAATGGTGATGTCAAACAGTTATTGGAGTTCGATGAGGGGAAGACTGCAGATTCATCTGAAGAAGTTGATGACAAATCTA GCAAAAAGGTTGAATGAAGTTGAAGCCTCTCCCAATACAATACCCAATACTTCTGGGTCACAGAAGAAATACTGTTATTTTCTGGGAACACTTTTACTTT TGAAGCTAACTTATTTAGCAGCACACATCTGTAACAAGATTTGTTATTTAAGAGTAAAGAAAACATTAGTCTTATTTTTGTGAATTAACATTTTGCTTTC ACATGCCTGGTCTGGGTTTTACATAGCCATGGATTTCTGCTTTCTCGTCCACACTTACATATACAATTTAGAGTGAATCTCGATTTTAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_164166; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_286262
| Blastp | Signal peptide peptidase from Arabidopsis with 76.69% of identity |
|---|---|
| Blastx | Signal peptide peptidase from Arabidopsis with 80.39% of identity |
| Eggnog | signal peptide peptidase(ENOG410XTES) |
| Kegg | Link to kegg annotations (AT2G03120) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019438402.1) |
| Pfam | Signal peptide peptidase (PF04258.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |