| Id Trinity | TRINITY_DN48820_c1_g4_i1 |
|---|---|
| Name Transcript | Ll_transcript_284376 |
| Sequence | CAGAGGTGGTGGTCAGATCATTCCCACAACCCGTCGTTGCCTGTACGCCTCTCAGCTGACCGCTGCCCCGAGGCTGATGGAGCCCGTGTACCTGTGTGAA ATCCAGTGCCCTGAGGTCGCTGTGGGTGGCATCTACGGTGTGCTCAACCGTAGGAGAGGTCACGTCTTCGAGGAACAGCAGGTGGCTGGTACACCCATGT TCGTCGTTAAGGCTTACCTTCCTGTCAACGAATCCTTCGGTTTCACCGCCGATCTCCGCTCGAATACCGGTGGCCAGGCCTTCCCTCAGTGTGTGTTCGA CCACTGGCAGATCCTTCCCGGTGACCCCCTGGACTCCGGCACCAAGCCCTTCACTGTTGTCCAGGACATCCGTAAGAGGAAAGGTCTCAAGGAAGGTCTC CCTGACCTCCAGTCCTACCTCGACAAACTGTAAATTACTGTTCTTGTTAGGTGTAAGAAAATTGAAAAGCCTCTCGAATGTCATTTACCCAAATTGTTTC TTTTGGAATTTTTTTAATGATATTTTACAGATAAGTAATCTTCAATGGGTGGTATTTTTTTCTATTGTGGTTTTATTTGTTAACACTTTGAGTGGTTGCC ATGCTAGAGGATTGCTGAGAGAAAGACCGTATGTACGAATGTGACATGAAATACG BLAST |
| Tissue | pods |
| Gene name | LI_gene_164195; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_284376
| Blastp | Elongation factor 2 from Sophophora with 87.41% of identity |
|---|---|
| Blastx | Elongation factor 2 from Sophophora with 87.41% of identity |
| Eggnog | Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome (By similarity)(COG0480) |
| Kegg | Link to kegg annotations (Dmel_CG2238) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019425548.1) |
| Pfam | Elongation factor G C-terminus (PF00679.23) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |