Ll_transcript_285848

• Id Trinity: TRINITY_DN48822_c1_g1_i9
• Name Transcript: Ll_transcript_285848
• Sequence: CAATTTTGAACTCAGAATTAATATGTTCTGGAAGATAAGTTCCAGATAGACTATAACATAATCTCTACTAAGCACGACCTTAATATTCCAATCATTCATT ACCTCTATACAAAAATATTTCACTACTAAGCTATACTTTTGCATGCCACGTTTCTTGCTTTGTTTCTCATAAAACTTTTTACATTTTGCATTTCATGAAT TGTTAGAGGGGTTGGGTTACTTCATGGGAAAATGACATTTAGGTATATCTGAGGAAGACTCAACCATAAACTTTACCAACAAAATATTTCATATTTGACA ACCTACGGGTATGTCCTATACTATGTAATATATGCAATATGAATACTAGTTGAGTTCAGCACCATCCTTCTATTGATTGAGTTTTTATCTAAGGATTTAG GACATCATGGATGAGAATATCAGTTCAAACATTGTACCAAAGACCAAGTGCAAATTTCCTCTCACAGTTTTCTTCAAAGATGCAAGACTTATTTTCAAGA TGGATTCCCTTGCTAAGGAGATACTAAGGATTGCATTCCCTTCTGCACTGGCTGTTGCTGCTGATCCCATTGCTTCTCTAATAGACACAGCATTCATAGG CCATTTGGGGCCGGTTGAACTTGCTGCGGCCGGAGTTTCCATTGCTTTGTTCAACCAAGCTTCAAGGATTACCATATTCCCTCTTGTTAGTATTACGACT TCGTTTGTAGCTGAGGAAGATACAATTGAGAAAATCAATATCAAAGCAGCTGAAAAGCAGTTCACTGAAGACCTTAAGGCCATGTCCAATGAAGTAATGC CAGATGATTATTTGCTTCAAGACATAGAAAAATGTGCACCCAAAGAGAATAAGGCCAATACAAATACAAAGAAGTCTTACGCGGATACTACTAGTAGTAA TAAGAGCGTGCCAAAAGCAGAAAGGAAGAAGCGACACATTGCTTCAGCGTCAACAGCGCTACTTTTTGGCACAATCCTTGGCCTCCTTCAAGCTGCAACA CTTGTATTTGCAGCCAAACCATTATTAGGCGCAATGGGTCTAAAACTTGGATCTCCTATGCTAAACCCTGCAGTAAAGTACTTGAGATTGAGAGCCTTAG GTGCTCCTGCAGTGCTTCTCTCCTTGGCCATGCAAGGAATCTTTCGAGGGTTCAAGGACACAACAACCCCTTTATGTGTCATCGTTTCTGGATATGCATT GAATGTGGCTTTGGACCCTGTCCTAATATTTTACTGCAAATTGGGCATCAAAGGTGCAGCTATTTCACATGTCCTCTCCCAGTACATAATGGCATTGGCC CTCTTCTCGATCTTAATGCGAAAAGTAGACCTCCTACCTCCAAGCATTAAGGATTTGCAGATTTTCCGGTTTCTTAAAAATGGAGGTCTTCTACTGGCAA GAGTAATAGCAGTGACATTTTGTGTGACCTTAGCAGCCTCATTGGCAGCAAGGTTAGGTCCAATTCCTATGGCTGCATTTCAAACCTGCCTTCAGGTTTG GTTGACATCGTCGCTTCTTGCTGATGGTTTGGCTGTTGCTATTCAGGCAATTCTAGCTGGTTCGTTCGCTGAGAAAGACTATGATAAGGTAACTGCAGCT GCAACAAGGACACTACAGATGAGTTTTGTTTTAGGAGTCGGGCTGTCTCTTGTTGTTGGAGTTGGATTGTACTTGGGAGCTGGAATATTTTCCAAAAGTG TTCTTGTTGTGCAGTTAATTAGATTAGGCATTCCGTTTGTTGCTGCTACTCAACCGATCAATTCATTAGCCTTCGTCTTCGATGGTGTGAACTATGGAGC ATCTGATTTTGCTTATTCTGCATACTCATTGGTCATGGTGTCACTAGCTAGTGTAGCTTCACTATTCCTTCTGTACAAGAGCAAAGGTTTCATCGGAATC TGGATTGCGCTAACCATCTATATGAGTCTTCGCATGTTTGCGGGTGTATGGAGGATGGGAACAGGAACAGGACCATGGCGCTTTCTGAGAGGCCCCTCAT TATCTTCATGATAGTGCTAACCTTACCATATTGTACTTTATCACCTTCCCCCCTTCTCTCCCATAGTTCCTATGCAAGTTCTTATTTTGTGCTTATTTAC ATTATTCTTCTTCCTACTATATCAGTCTCTAAACTCATGAGTGCTTATATATATACATACATATGAAAAATAAATTGCTTTTCAAAAC
• Tissue: pods
• Gene name: LI_gene_164219;
• Additional information: details;

Expression of Ll_transcript_285848

FPKM

• PAB: 0.4
• PNAB: 0.3
• PS1: 0.9
• PS2: 0.3
• PS3: 0.9
• PW1: 0.2
• PW2: 0.2
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_285848

• Blastp: Protein DETOXIFICATION 43 from Arabidopsis with 63.39% of identity
• Blastx: Protein DETOXIFICATION 43 from Arabidopsis with 63.39% of identity
• Eggnog: Mate efflux family protein(COG0534)
• Kegg: Link to kegg annotations (AT3G08040)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425461.1)
• Pfam: MatE (PF01554.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;