Id Trinity | TRINITY_DN48864_c0_g1_i4 |
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Name Transcript | Ll_transcript_284167 |
Sequence | ATTTATATAACGCGAGGGAGGGAGAAAACTTCACTCACATGCGAATGGCGTTTCTCACTCATCGTAATTTTGATTTTTCATTCATTCATTCTTCACTGCC AAGGTAGAGTGATTTTATGAGAGAGAAGAATTTGATTTATTTGAAATTGAAAGCGTTGCGTTTTTGTGTGAATTGGAATTAGCATTGCGATAATAAGAAT AGCAAAATGGTGAATCGACGGTTCACTCAGGTAGCTACCAGCGATGATGAAGATGACGCGCCACTTCAATCTCCTCCACAATCCAAGCAACAACCGAAGA GGAAGAGGATGAAGCTTCTATATGAAGACGATGAAGAAGAAGAAGAGAATAATGAGAAATCCAAAGAAGAGAAGAATAATGAGGAAGAATTGCGAGAAGA AGAGGAGGAGGAAAAAGAGGAAGCGTTAGGGGAAGCTAAACCCGTTGGAGATCCGGTTAGGGTTTCAGGAAAAGGGAAAAACAGAAGGAAACATTTTCAT ACCCTCGAATACGATACAAATCATTACACACTTGAGGATCCTGTTCTTCTCATTCCAGAGGATTCAGAACAAAAGCCATATGTCGCCATTATTAAGGACA TTACACAGCGTCGAGATGGTAGCATGATGATGACAGGGCAATGGTTTTATCGTCCCGAAGAAGCACCAAAAAAAGGCGGTGGATCTTGGAATCCAATTGA TACAAGGGAGCTCTTTTATAGTTTCCACCAAGATGAGGTTCCTGCCGAGTCTATTATGCATAAGTGTATCACACATTTTATTCCTCCTCACAAACAGCTT CCAAAGCGGAAGCAATATCCCGGGTTTATTATACAAAAGGTGTATGATATTGATGAAAAAAAACTTTTTAGGTTAACTGATATGGAATTTCACAACGGTA AACAAAAAGAAATTAGTGTGCTCATTGAGAAAACTCTAAGACATATAGGTAATGATCTACTTGACATTGAGACTGGACAAGCCCCTGCAGATCAGGATCA CGAGGTGAAAAATAAACGAAAATCTATGAGAAGGAACATTTCACCTCTTGATGTTTCAAGGGAGGAGGAAGAAAATCTTACTAGTGACAAACATCTGAAA CCTGAAACACCAGGGAGCTGTCTAAATAATGCCTCACAGCATTATCGCATACTGATGAATTTCAATGCACTAACTGGAGATGGCCATCGTGACAAATGGT TGGAGAGGATGCTTCAGCACATTCAGTACATGTGTAATTCTGATGGTAGCACATTAAGGGATGACAAGGGATTGCAAAATGCCAATTTTGCTGAAATAAA AAGTAGAAGCAATAATATAAGTTTAGAATCTCCAAATGATTGTCAAATCAAGGGTGAAAAGGTTTCCAAGTATTTTATCTGGCCAGATGCTGCAGTTCCT GCAATAGTTGCTCTTGAAAAAGCTTCACATGAAGCTTTTTCATCAGATTTTCAGAAGTATAACCAAAAGTTGCGGTCCCTAGATTTTAATCTCAAGGTCA GAAGCTGATCTACATTTGAAATATCTATATTTATGTCTTTGGAAAATTTACACATGGCTGACATTGGAAAAAAAAATACATTGATGCTACATTTTAAAGC TGTACTTCTGTACTTGTGTTATTTATTAAAATTTATGTCTAGGAGGTTGAAACTTAAGAATGCCTGATAGAATGATTTATCTTTCTACTCAATAGCGATG AATTGAATGGGTGGATGATCATGTTGCTGCATACTAAGTAATAATGTCTACACATCCATTGAATTGATCTTTTTGTCTGCTATGATAACGATGGATTGAT ATTTTTATTATTCTACTTTTTCTTTGGGTTCTTTGAAGAGCAATGCATTGCTTGCACGCCGTCTATTAAATGGAGAGTTGGAACCTTCAAAAATAGTAAA TATGACACCCACTGAATTGAAGGAGGGTTTGACTGATGAGGAAATAGCCAAGAAAGAGCCCGATGAGTTACAAAACATGCAGATGACAGATGCCCGCTGC TCAAGATGCAACAAATCTAAGGTGGGCGTGAGGGATATTATCCGTGCTGGAGTTAGTGACCGTTATCAGCTGGAATGTATTGGCTGCGGTAATTCCTGGT ACGCATCCCGGGATGAGGTGTCTGCTCTTACCATAGATGGATCAACTTCAAAGAGAAGCAATGGAACAGAGCCATTGCCAGCTGCAAACATAGTAGATGG TGAGAAGAAGCTGGTGAGTCCTCGTGAAACTGATAAGTCAGCAAAGGACGTGGAAGAAGAGAAGTGAAGCGTTTACACCTATTTTGTATTGGATGCCAAT AAATCACTTGGCAAGTCTAGGAAAGATGAGAGTATTGAGGCTACGGGACATGTTGATTAGGATAAGAGCATTACTGTATATGATATATCCCTATAAAATA ATCTCCTTAATACTTACCAAATAAAACATAGACAAGAAAGATTAGATGCGGTTAATTAATAAACACTTCAATTTATTTTCGTCCCTGTATGATCTGCCTC TCACTGTTTTCTGCCCAACCTCACCCCTTCAACTTTTATTTATCATGTTCACCATTTATTAAATGGAGATGACAAACTAACGGA BLAST |
Tissue | pods |
Gene name | LI_gene_164626; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_284167
Blastp | Chromatin remodeling protein At4g04260 from Arabidopsis with 32.29% of identity |
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Blastx | Chromatin remodeling protein At4g04260 from Arabidopsis with 32.29% of identity |
Eggnog | bromo adjacent homology domain containing 1(ENOG410XQP1) |
Kegg | Link to kegg annotations (AT4G04260) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019421341.1) |
Pfam | BAH domain (PF01426.17) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |