Ll_transcript_284661

• Id Trinity: TRINITY_DN48876_c1_g2_i2
• Name Transcript: Ll_transcript_284661
• Sequence: AGTGCTTTTTCCTTTTCAATCTTTCACTTTTACTACCCTCACTTGGCAACCAATAAATGGAGAAACCCTATGTGGTCCTCACCCATTTTGTCACATTCCA TTTACTTACCCTTCTCCTTTTTCTATTTATATAAAGGTTTTATGGTCTTCTTCTCCATAACCTTCTTCCACTTCCCTGAACCTATTATGGAAGGAAACTG GGCTGAGGGAAAGAGAACCTTGGAGTATGATGATGAAGAAGATGAAGAAGATGAAGTGATAAGTGAGATAATGAGTAATGGAGATGAAGGAAGGAATAAG AAAAGGGCAGTGACTAAAGATCTTTATAGAAGCAAAAGAGGGTCCAAAGCAGGAGGATCAGTTGCACCTTCTTGTCAAGTTGATAGTTGCAAAACTGATC TAAGTGATGCTAAACAGTATCATAGGAGACACAAGGTTTGTGAGTACCATGCCAAAGCTCCTTTTGTTCTCATAGCAGATCACCAACAAAGGTTTTGCCA GCAATGTAGCAGGTTCCATGAGGTGTCAGAATTTGATGAGTCAAAAAGGAGTTGTAGAAGGCGTTTGGCTGGACATAATGAGAGGCGTCGCAAAAATGCA GCTGATTATCACGGTGAATGATTTCATTCATTCATGAGATGCAGCCAAAATGAACAATGAGCCAAGCACCACATACATAGTTGCAATAAAGTATCACATG AATCCATCATATCCAAAATTCATTGTTATTGGTAACTCAGTATGCTCTCTCTCTTCTGTCAATCTATTTTGCCTATTTAAATGGGCTTAGAGTTTTTCAT CTGAAATCATAAAATAAATTTGCTTATATACCCATTGAGAGTTTTTATGTTTGAGTAGTAGCTAGTTCAATTTATGAGCATAAATTTGTCTAATATCTTG AATGACCGTGCTTTTAAAGAGTGAGACGTTCTTATATTGGTTAGGTAAATTATTATTGAATCAATAGGCCAGGATATAATGTTCAGCTTGAATCATAAAC ACTCCTAGTTAAAGGCTTCATGCTAAGAAAATAAATGGGTGAGATTGAGTGTAATCAGTGTAACTTAAAATGGGTGTAAACTGATCATTTTTCTTAGGTA AAGGGTAAAAAATGCAAGGTTTATGTAAATGATAGTGGACCCATCAATTTTCTGTTTCCTTAAATTGAGTTGTAGTAGTGGATAGATGACTGCTACTTCA CTTTGTTGAGGTATGGTTATTGAGTAAACTAAATATTATTTTTTTCCTCTTCCAATCTTAAAATAAATAAAAATCATTTCAGTAAACAACCATTTTTCTA TTTGGAACTTTACATGATCTCAATTCTCAATTTCTCATTAAAAAAAATTCCTTATAAAGAAAATAACCAGACAATTAAATGATAAAATTAGTCCATGTAA GCAGATAAAATCAAACCTGAAAATTATTTACTTACTCTAGTTACTTGGATATTCTTTTTACCAAGGTTCGTCCGAATTATACTCTTTAGCCATGTTCAGG GGCAGAAATGCAAACTAAAACTTGAAGTGCAAATAAGAAAAAGAAAATAAAGGTTAACCAGTTTGATTTAGTTTGGCTTTTCATGCAAATCAAACCGTGA ACAATGGTTAATTGCATGGTAAAATGCATAACATAAAATAACTAGTGTTGATGAATAATCACCTTCAAATTCTAATGAACTGCAAGCATGATTCTTTAGA AACTTTGAACTTATTTCCTTGATTTTCTGTTCAGTATAATCCAGTGCAGAATATGCCAATCAAAAATATTATGGGTTATAACTTACTAAGAAAAGCTTCC TTAGTAAGCACTCCACTCTTTCCAATATTAGAAGGCATTTTGAAAATATCATTTCTTTCAGCAATAAACTTGGCAAACTGAGAGCCCTTGACGTCTTTGC TTTTATTGTCTACAAGAGACTGAGGAAGGTTAGGCATGCCATTGACCTTGGGAGACGATGGTCGCATCAATGCCCATACGGATGAAATGTATTCATCCGG TTCGTCTAAAATCCGTAAAAGTGAGAAATTCTTCATGTCTGCAGTGAAAGAGCAATATCGTAAGATGCTGACCTAGAAAGTAACAAAAAAATGTATTTTT GATTACTGATATAACCAGTTTCCCAAGATTTCTAAAGATGTAACCAAGGAATTGTATGGTTTAAGGAAAAAAATTATTTTCTGTTTTCATTAATAATTAG TACAAGTATGCTGCCTTGTTTTCATTTTTGTTTTCGGTTTCCGAAGATTTGTACAGGAAATGATGAAAACAAAACATATGCCATTGTCCTTGTTGCCTGT ATAAATCTTTGTAAATAGGAAACATAATGACAATAAGATGACATACTTATAATTATTAATGAAAAACGAAAAACAGATTCTTACTGAAACCAAACAGTCC CTAATTGATCTTAGGTAATATTCCTTGTGGAACTAAACAAATACTTTAAAAGCATACCTTTTGAGAACTTGAAGACGGGGAGCAGAGCTGCTGACGGAAT GCTAAAATTAAGATGCGGTATTATCGTTCCACCACCATGCCTTGCATTGCTGTGACAAAAACATTATCTAATCAAATATGATAGTATAATCTACAACCAG TCGGGACCGATAAAAAGAATAAAAAATCACAAAAGCTTGTGTGTTACACAGAAAAAATTAGGACCAACCAGTGCAGGCTGGCCTCATGTGAGTAAATAGG GTCAACAAAATCAGCATCATACAGCAGTGACAGTAAGGGCGAAAGCTAAAGATTTCCACCAAAACAATTCAAAGCATGAATGAAGCAAGATCAGGTCAAA ATTTAAGTTGCAG
• Tissue: pods
• Gene name: LI_gene_164731;
• Additional information: details;

Expression of Ll_transcript_284661

FPKM

• PAB: 1.4
• PNAB: 8.7
• PS1: 9.4
• PS2: 0.2
• PS3: 2.1
• PW1: 5.4
• PW2: 12.4
• PW3: 7.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_284661

• Blastp: Squamosa promoter-binding protein 1 from Antirrhinum with 54.17% of identity
• Blastx: Squamosa promoter-binding protein 1 from Antirrhinum with 52.82% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019418278.1)
• Pfam: SBP domain (PF03110.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;