Ll_transcript_284854

• Id Trinity: TRINITY_DN48894_c0_g2_i3
• Name Transcript: Ll_transcript_284854
• Sequence: CAGATTAAATTCCAAGTATTGAGTTATATTTTCAACACCTATTATTCACTGTTCACCATGTCCAACACTTTCTTTGTCTTTATTGCTGTGCCCTCTATGT TATCTTATTGGTTTTGAGTTTCTAATAATGTCATTGAAACTTCACTCTTTCAAAATCAAATCTCATTCACCAACAAATGGCTTCCTTTGAAGAACTTCCT CAATCACAAGATAAAAAACCACTTTCTTCATATATATGCCATGATCCAAAAAGCCTTGGTTCCTCAAGGAACAAGGTAGAGAAAGACAAAAATGGTTCTT CTTCATCTCAATTCAAAAGGGTTGCTTTATCTTCAGAAAGATCAAATTCTAAGTCATTGGTGTCAGCAGATTCAAGAACTTTTGCAGGACCCCTTATGGA TGAAGTTGCTATTAGAGCAGTGATTGCTATCCTTAGTGGATACATTGGAAGATATGTAAAAGATGAACATTTCAGGAGAACAATCAGAGAGAAGTGTAAT TCTGTGTTGGAGAGAAGAATAAAGGACTCAAGTGATGATGAGTTTTTTGTGAACATGGAACTTGGTATGGAAAAAGTTGATAGATTAGTAGAAGATCAAG GGACTAAGAAACATGTCAAAAATTTGAGAAACTCCATTGAGATTTTAACCATTGTTGCATCTTTGAATTCTAAAACTTCCAAGGATGCTTCAACTTGGGG TGTATCCTATTCCAATCTTTCTGCTTGTGCTGAATTGTATTTGGCAATAGCTTACAAGCTGCAGAAAAATGAAAGGGTTTCATCTAAGCATTTACTTCAA GTGTTTGGTGATTCTCCATGTTTGGCTAGAACCTATTTGCTACCTGATCTTTGGGAGCATTTTTTTCTTCCACATCTTCTCCATATCAAAATATGGTATA ACAATGAGCTTGAGTTCCTATCAAATGAAGAGCATGTTGTGAAGAAAAAGAAAATAAAGGTATTGAGCAAAGTATACAATGAAAAAATGGATACTGGAAC TACTTTGTTTGCTTTGTACTACAAGCAATGGCTTAAAGTTGGGGCTAGTGAGCCTCCTTTTCCTATTGTCTCCTTGCCATCAAGACCAAGTTATAGGTCA TCAAGAAGAATGTCTTCCGATTCGTCCTTTTCAAATTCCTCCATCAACCCAAACTTATACAAAGCAGTGTTTGGCCCCCAACTAGAGCAGCAACCTTCTG GTCTTGGTGAACAGAATGGAGTGTTGACAATTAGTACATGCTCCGGGACTGATGAAAAACTGTGTGGAGATGAATATCTTTGCAATTCTATTCAGAAAGA AGACAATATATATCCTGGAAGATGTTCAAGTCAAATCGACATGAGTCATTCTCGAATATGGCCTGAGTCACAGAAATTGGACTATTCGCAGTGGTTTTCT TGCAGGACCATACCAAAAGAAAGCTTCACGAACAGCAACTATACATCGAAGAATGCTTTGATTAGACAAGAAACCAGTGTTTTTTCAAGTGATTTTGTTG GAGCTATTAGAACTTTATGTTCATCGGATATTCTAAGAGAATGTGAGTTTGCGATTCGTGTGATTACCAAAGCTTTGTTGAACTCTCCTGGTGATCCTCT CATTGAAGAAGCACTGACACAAACTAGCGTAATTGAAGCTATTATAGAGGTGTTATTTGCCTCAACTGAGGATGATGTTCTAGAATTGATTATATCAATT TTAGCAGAATTAATCGGAAAGAATAATGCAATTGGTGAAATTCTACTGAACTCTGATCCTCAACTAGAAATATTTGTGAGACTTCTAAGAAGCAGTAGTC TGTTTCTGAAAGCTGCAGTTCTGCTTTATCTATCAAAGCCACAGGCAAAACAGATGTTATCATCAGAATGGGTACCACTAGTACTTCGAGTGTTGGAATT CGGAGACAAATTGCAGACCCTATTCACAATACAGTGCAGTCCTCAAGTGGCAGCATATTACTTCTTGGACCAACTTCTTACTGGTTTCGACGAAGATAAG AATTTAGAGAACGCTAGGCAAGTTCTTTCACTCGGGGGATTGACCCTGCTAATGAGAAGAATTGAAGAAGGAAAGTTTCATGAGAAATATAATGCTTCTT TTATAATTTTGTGTTGCATTCAAGCCGAAGGAAGCTGTAGAAGTTTTTTAGCTGATAATATAAATAAGACTTCTTTGTTGGAACTCATTGTTCATGGAAA TAAACAAAATTCCAGTGGCTATGCCTTTTCTGTGCTAGTTGAGTTGCTCTTTCTTGATAGAAGAACCAAGATTTTAAACTTCTTAAGAGGGATTAAAGAT GGATGGGCTGGCTTAAACATAATGCACATTTTCTTCATTTACCTTCAGAAGGCTCCACCCGAAGAACGCCCCTTCGTTGCAGTGATATTATTGCTGCTTG ATCATATGGAAGATCCTTTGAAGGGAAGTTTATATAGAGAAGAAGCAATTGATGCAATTGTAGCCACTTTAAATAATCAAATATGTAATGATAGAGTTCA GGAGCAATCAGCCAAAGCTCTACTCTTATTAGGAGGCCACTTTTCTTGCAGAGGAGAATCACTAATGGAAAAATGGCTTTTACAACAAGCCGGTTTTCGA GAAATTTCCTTAGAAGATTCATTTCCCGGCAACGAAATTATTGTTCATGATGCACTCTTCAATACTAAGGAGGAAGAAGATGAAAGTTGGCAACAAAGAG CAGCTTGTATCTTGTTCAAAAGTGGAAACAAGAATTTGCTGTCAGCACTTGCAGATTCAATAGCCAATAGCATTCCATGTTTAGCACGTGCGAGTCTTGT AACTATTTCATGGATGAGCAACTACCTCCACTTAGTTGAAGGTAGAAACTTGCCACAAATGGCTCTATCAATCTTAAGGCCACAGTTGCTACAATCATTG AATTATGATAAAGATGTTGAGGAAAGAGTGCTAGCTTCATATTCATTGCTCTCTCTAACCAAAAGTTCAGCATGTGTCTATGTCCTACCATCAATGGATA AACACTCACTAAGAAATCTCAGAAATCTGTCTCTAGTGACTTGGACTGCAAATGAACTTATCTCAATCATCTCAAAAAGTAGCTTGCAATCAAGACAATG ATAAGCTGAATCTGTCAATGTTCATTCTTTCATATAAAGGTTACTACTGTAATCACCCTTGAATTTTTGTATAGTTGATTAGTTTGAAATGGAATATTAT GCACCAAGAAACATAATATTTGTTTTTTCCATGGTATAGCTTATTATGATGAAGTTCATGATCTGAAAAACTTGTTTAGCCTAAACAAGAAAGCAGCTAC AGAAAAGTGACAAAACACTAAAAAGTAAAAAC
• Tissue: pods
• Gene name: LI_gene_164853;
• Additional information: details;

Expression of Ll_transcript_284854

FPKM

• PAB: 1.3
• PNAB: 0.8
• PS1: 0
• PS2: 0.1
• PS3: 0.3
• PW1: 1.2
• PW2: 2.5
• PW3: 1.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_284854

• Blastp: Putative E3 ubiquitin-protein ligase LIN-1 from Lotus with 30.86% of identity
• Blastx: Putative E3 ubiquitin-protein ligase LIN-1 from Lotus with 31.27% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019419627.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;