Ll_transcript_435842

• Id Trinity: TRINITY_DN48948_c1_g2_i1
• Name Transcript: Ll_transcript_435842
• Sequence: GTTGTTTTTTTCATTATTATACCCATCTCCTACTCCTTCTCCTGCTCCTACTCCTACTCCCTTTTCTCTTTATCTTCTGTCGTTTTAATCTCTCCTCTAA CTCAATATAACACATTCTTAAACCTTCTTCCTTACTCAATCCAAAACTTTCTATTCTCTCTTCTCTTCTTCCGTATTATATTTTTTTTCCATAAAACGGA AGATTTTGTCCTTCTAACTTGCTCTTTTTTGTTGTTTTCTCTTCTCATTGTTTGATTTACGTTCATCTTTGTTCCTCTTCTTTCAATCTCCTACCAGATT TTTGTTTATTCCGTAACGTTTTCTGTTTCTCATATAACAATAAGAATGAGATCTAATTTTGAAGGATCCATGTCTAAGAGGTTTGATTGTGAAGAAAAGG ATACGAAGAAGAAGCGTCGATCTAATCGTCGATCCAAACAAAACCATGCTCCCTTTACCACATCACCTGAAGTAAGTGAGATCAATGGGTTGTCGTTAGA GTGTTCAGAAAAAAATGGAACAATCACTCGTCCCACGACCGCTGCAGCCTTGGGCAGTTCAACAAACCAACAAGGGGTTAATGTTACTTCTCTAGATGAA CAAGGTTTATCCAGATCATCGGATGTTGCTTTCGTTTCAATGCCCCAAATGCACATCAACGAGCAAGTTGAATATTTTGGTTTACAAGAGAGTGAAGATA CACAAATACATAGAGGTGGAACAGGTTCAAAGTCGTTTTCTGAACCCACTGTTTGCAGAGGATTATTGGGAACGGATACTAATAAAAAGAAAGAATCTGT CCCTTGTAGTCTAATTGGGCATTATTATGGCCAGAGAACTTATTTTAGTCCTCACTGGTCTATGGATGCTGTTGAAAAGGCAATAGAGAAGGGTGATGTC TTCAAAGCTCCCTTTTATGTCAATGCTCATAATAGACTTGAGGCCTACTGTAGAATTGATGGAATGCAATTGGATATTCTCATCAATGGATTTCCAGCCC AGAATAGAGCTGTGGAAGGTGATATTGTTGCAGTTAAGATTGATCCTCTGTCAATGTGGACAAAAATAAAAGGATCCAGTGTGACATGTAAAAATACTGC TCCACTGAGAGTCTGTAACTTCCTTACAGAAGATGATGAAGTGGCTGATAATTTTTGTAAAGGAAAAGGTAAGCTAGATGCTGAGCACAACTCTGCTCAT AACCGAAGCTCCCCTGGTCAAAACAAGGAAGATGTTGATCACAAAACTATCCCTTGTAGGAGCAATCATTTTCCTGAGAAAGGATATGATTATGAAAATA ATGGTTCCATGGGTTCAACTAACAATTTCGAACCACATGGAAAGACCAGCCTTGATACAGTTGATGGACTGCCCTGTGCTGCTTTTGCCTCCTTGAAGAT TAGTGGCTGTAATGAAAAGAGTGAAGTAATTAATGCAGTAGATGAGTTGTGTTTGTTGTCTAATTCTTTCCCTTCTAAAAGACCAACTGGCAGGGTGGTT GCTATTATTGAGAGGTCTGCACGTCGAGATAGTATAGTTGGTCATCTGAATTCGAAGAATTGGGCTGCTTCCAATGCCTTGAGCAGAAAAGATGCAGAGA AGAATAGGAACATGTTTTCTGGGCATGAGTATATCCAGTTGATACCAACTGATCCAAAGTTTCCGAACTTGATGTGTTTTGTTAAAGAATTACCAAAGTG CATTAAGAAAAGAGTGAAAAGTGGTGATGTGACCGTTGACATGGATCTAGTAGCTGTACAACTTGATGATTGGGTTGAAGAAAGTATTTTGCCTAAGGCT CACATCTTGCATATTTTTGGACGAGGTAGTGAGGTTCAGCCCCAGTTAGATGCAATTTTGTTTCAGAATGCAATCTGTTTGTCTGAATTTGCACCTGAAG CTTTGTCCTGCCTTCCATGTGTTCCTTGGGATGTACCGCTGAAGGAAATTCAGAGTAGAATTGATCTAAGAAATTTATGCGTTTTTACTATTGATCCTTC TAATGCCACAGACCTGGATGATGCACTGTCTATTGAAAAGTTACCGAATGGGAATTATCGGGTAGGCATCCACATTGCTGATGTATCATACTATGTTCTT CCTGACACAGCCTTAGATAGTGAAGCTCAGCTTAGGTCAACTAGTGTCTATATGTTGCAAAGGAAGTTACCTATGTTGCCTCCATTACTTTCTGAAAAGG TAGGTTCACTTAATCCTGGAGTGGATCGACTTACAGTTTCCATGCTCCTGGAAATGAACCTTGCTGGAAATGTTGTTGACCGTTGGATTGGTCGTTCTGT TATACAATCTTGTTGTAAGCTTTCATATGAACATGCTCAGGAAATCATCGATAGTGCTAGTGGTTCAAACATTGTGGCAAATGATTTTCCAAAAGTGCAT GGCTGTTTTGAGTTGCCTGATATTATTACATCTTTGAAGAGTCTTTATGAAATTTCAAATGTTCTGAAACACAAAAGGATTGCGGATGGAGCTCTGCGCC TTGAAAACCCCAAAATTGTTTTCTTGTTGGACAAATATGGAATTCCTTATGATAGTGTATTTTCTGAACGGAAGGAATCAAATTTTCTTGTTGAGGAATT TATGCTTTTAGCCAATAGGACAGCTGCTGAAATCATCTTTAGAGCTTATCCTGATTGTGCATTATTGCGGAGGCATCCTGAACCTGATAGGAGGAAGCTG AGAGACTTCATGGTATTTTGTCAGAAACATGGTTTAACGTTGAAGATTTCTTCATCTGGCCAAATACATTGTTCATTAGAGCAGATCAGGGAAAAACTCA GGGCTGACCCCGTTCTTTATGATATTGTTATTAACTATGCTACTCGGTCAATGCAGTTGGCTTCTTACTTCTGTAGTGGAGATTTGAAGGATAGTGCTCA TGAATGTGGTCATTATTCGTTGGCTGTCCCTTTTTACACCCATTTCACGTCTCCTCTGCGTCGCTATCCTGATATTGTTGTTCACCGTACACTACTTGCT GTTATAGAGGCTGAGGAATTATATTTCAAGTATCAAAAAGCTTCTTTACAGGTTAACAAAGATGTGGAAGTGCTTAAACGATGTTTCACGGGTATCAATT TTGATAAAAATGCTGCTGGGTCCATGGAAGGTAGGGAAGCATTATCTGCTGCAGCTTTGAAGTATAGAATTCCATGCGCTGAAGTGCTTGCTGATGTTGC TGCTTATTGCAATCAGAGGAAACTTGCTAGTAGATATGTCAAGGATTCCTGTGACAAAGTTTACATGTGGTTTCTTCTGAAGAAGAAGGGGGTTTTATTG TCAGAAGCAAGAGTACTGGGACTTGGCCCCAAATTCATGTCAATTTATATTGAAAGGCTAGCCATTGAGCGGCGCATATACTATGATGAAGTTGAAGGCT TGACTGTAGAGTGGTTTGAGAAAACATCCACTTTGGTTCTTAGCTTGTCTGCTACCAATAGACGTGCATTTAGGAGGGGTGGCTCTAATAAGTGGAGAGC TTTTGATGAAGTTTCATTGCTTACGTGCGCATATAACCTAGAGCCTGCAATGGATGAGTCTAACATCGATGGGGAGCTTGGTTCTAGATCAGTTAATTCC GAGGCTAAGATTGACCCTGCATTTTTTCCTCTGACTGTTCGTATTCTTTCGACAGTTCCAGTAGCTCTTCATGCCGTTGGTGGTGATGATGGGCATCCTG ATATTGGAGTGAGGTTGTACATGAAATCGTATTCCGGACAAGTTGACCATTAAAAATGGAAAGGACTTCTACTAAATTGTAGATAAGTAGTGTTTACCTT AATAGACATAGGCTGGGGAATGTTACATGGTATGGTCCTAGTTCTTGATTGCTCTATGATCATGCTCAACTTTGGAAAGTTCAGTTGTAGCTTAAGCCTC AGCCTGCTGTTTCTAACAGAATATTCTAACCGGAATTGGCTTGTTTTTTGTTTGCCCGTTCCTTTTTCATAGTGTGTTCAGGTATTGGGTTCTCTTATAG AGAGAACCAATTCATAGTTTATATCTCTATTTTGGTTGGCCTGAAACCCAATATTTTTTGTTTAGTTTGGGTGGCTACTTTTGTAATTTGGTCAGACATC TTAGTTTCTGATTTAGTGAACTTTCAAGTGGAATATTCTATTTTCGCATTTTAAATGGTCTTTGGAG
• Tissue: pods
• Gene name: LI_gene_165305;
• Additional information: details;

Expression of Ll_transcript_435842

FPKM

• PAB: 0.3
• PNAB: 1.9
• PS1: 2.6
• PS2: 2.8
• PS3: 3.5
• PW1: 4.1
• PW2: 2.5
• PW3: 1.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_435842

• Blastp: DIS3-like exonuclease 2 from Arabidopsis with 48.15% of identity
• Blastx: DIS3-like exonuclease 2 from Arabidopsis with 49.67% of identity
• Eggnog: 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs (By similarity)(COG0557)
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019459551.1)
• Pfam: RNB domain (PF00773.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;