| Id Trinity | TRINITY_DN48948_c2_g2_i4 |
|---|---|
| Name Transcript | Ll_transcript_435874 |
| Sequence | TGTAGCTAAGGTGAGAATATTCCAATCACATTTTTCTTAAAAACCAATCCCAACTCACTTCTATAATCTCAAACTTACACACCCTCTCTCTCTCTTTGTG GTGTGTTGTTTATTTCACTTCTATAGCTATTCCAAACTGCACCAAGTACATTGGAAATTGTACTACTCTTGAGTCTTGAGATGTCAAGTCTTCTTCTGAG GGTGAGTTTTGGACCAATAGAAGACACCAACTCCTTGTTGGGTTTTGCATGCAGAAGTCATATTATTGAAAGAACCCAAAGAAGGTTGAAAGGAGTCACT TTTGCAAATAAGGCTGTTGCTTTATCAAGTGCTGTAGTAGCAAACCCAGTAATATCTTCAGAGGAGAAGGTCTATGAAGTGGTGCTTAAGCAAGCAGCTT TGGTTAAAGAAAGGAATAGGGATGCAAAGATAGCCTTGGATTTGGATAGTAAGCCACTGGAAAATGCTGAATTCAGCAATGGGAATTTGTTGAATTTGGC TTATGATCGATGTGGTGAAGTTTGTGCTGAGTATGCTAAGACATTTTATCTTGGTACTTCTTTCTCTATCTCTTCTTCTTTTCCAACTTCTCTCATTCAT TGTCCCTCTCTCAAATGAGTTTAGTGGAATTTGGCTTAAATTTCTCTCAACTTATCAAATATCCTAATATCAACTTAACCTACAGAAATCTTCCTATTAT ATACTACCATGTACCATTTCATTTATCAGAAATATTCATCTTATCAAAAATATTATATGTTTATCTGACAAGAGAAGTGATAACTAATAGTAATATAGAT TTCTATTGATTATTAATGCCTCATATGTTGACTTATTTTGAGGTGAATAAATTAGTGTAATGGTGTTGTGCACTTGACTTAGAGAAATGATTCTTTACCA TTGATTTGGAATTGAGAATCTGGTTAGACCAGTATCCTTGAACCATGTAATAATTTCGATGCGACTTCTCTTCTAACTGGAAATTGTAGGCACACGATTG ATGACCGAAGAGCGCCGAAGAGCCATCTGGGCAATCTATGTGTGGTGCAGAAGAACTGATGAGCTAGTTGATGGTCCAAATGCTTCATACATCACTCCTT CGGCATTGGACAGGTGGGAGCAACGACTAAACGATGTCTTTCAAGGTCGTCCTTTCGATATGTACGATGCTGCCCTCTCGGACACTGTCACTAGGTACCC TGTAGATATACAGCCTTTCAAGGACATGATAGAAGGGATGAGGATGGACCTGAGAAAGTCGAGATACAATAATTTCGATGAGCTCTACCTTTACTGCTAC TATGTTGCTGGGACAGTGGCTCTTATGAGTGTTCCTGTAATGGGCATAGCTCCTGAATCTAAGGTTTCAACTGAGAGCATTTATAATGCTGCATTGGCAC TAGGCATTGCAAATCAACTTACCAACATACTCAGAGATGTTGGAGAAGAGTAAGTTTCTTTGAACACATCAATGTCATGTATAGAATTGAACCAAAAACA ATTATGTCATTTAATATACCAGGCCTAGAATATCATTTAATCTCAAGTATGAATCGTTGAATCCAATTGAACCGAAAATGCTACATATGCACATTTATGC ATATATAATATATCACCTCAAATTTGTAAAATTTCTACCATTTGATTATTGGTTATCCCTACACATCTACCATATAGTATATACATATGCTCTTGTTTTG TAAACTCACAGAAATGTGATATATTTCTACAATGGTTAATGAATAGAAAGATACGAGGCCAAGTTAATAAATATAAGAAACTAGAACACTTACTTTGCCT ACTTTTGTCTTTCTTATCATTACAGTGCTAGGAGAGGCAGAGTATATCTCCCACAGGATGAATTGGCAAAGGCTGGCTTATCCGATGAGGACATTTTCTC TGGGCAGGTAACCGACAAATGGCGGAGTTTCATGAAGGGCCAAATAAAGAGGGCAAGGAAGTTTTTCGATGAAGCAGAGGAGGGAGTTACACAGCTTGAT GCAGCTAGCAGATGGCCTGTGTGGTCATCATTGTTGTTGTATAGACAGATCTTAGATGCTATTGAAGCCAATGATTATAATAACTTCACAAAAAGGGCTT ATGTTGGAAAAACAAAGAAGCTATTATCACTACCTGCTGCTTATGTTCAAAAAGCCAACATCTTAAGCAACAAGCCATGGACTTCACCTTTTCCTCACTC TATGGC BLAST |
| Tissue | pods |
| Gene name | LI_gene_165308; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_435874
| Blastp | Phytoene synthase, chloroplastic from Daucus sect. Daucus with 60.47% of identity |
|---|---|
| Blastx | Phytoene synthase 1, chloroplastic from Lycopersicon with 87.1% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019435350.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |