Ll_transcript_438226

• Id Trinity: TRINITY_DN48951_c1_g1_i14
• Name Transcript: Ll_transcript_438226
• Sequence: GTTTCCGATAAGCTGGGTCATTGTTCGAATGGAACAAAACATCAACACCACCACATCTTCTTCTTCTTTCATCTCTTCTCATCTTCAACTACTTTGAGCT TTAGTTAACTTTCATTTTCTCTTTCTTTCTACCCTTTCACTACACACACCGTCTCTTTTTCTATCTCTAGAAAATATTAATAATAAATCACACAATTCTC ATATGCCCGGATTTTTCTTTCACTTTCTTTCTGTTGCTCACCCACCAAACATTAACCAACCCTAGAGAACACTTCATTTTCCTTCTTCTCTCTCATTTTC ACAGAGATATTAAGCAACTATGTACGTCTGAGACACAAGGAAATATCATTTGGAAAACTCAACAACTCCTGAAATCTGACAACAAACAAGATCGGATACC CATCAGCAAAATTTTCTGATTTAGCTTCAATACAAAGCAGAAAAAGGATTAGATCAAAGGGAGGAGAGGGAAGAGTATCTGAGACATATTTTCAGTCTTA GCTTCTTTTAAAAGGATTCTGCAAACTGCAAAAAACTTAACAAGGGTCTCTCTGACTTGGACTGTGATATATCAAAAAAGCCTTTTTATCACTTCACAAT ACACAACCAAAACAGTGTCTGAATTATCATCATCAATGCAAAAGGACATAACCAACCCCACCCCACCCCACCCTCTAGCACTCTCTCCACTTCAATTTCC ACACTCCCTACTACTTACTGCTTTTCTCTCTCTATCTCTAAAAAGGAATAAGTAAGGAGACAAGGTAATAAAGAGAAAGGCAAAGAGTGATTGTTTTGTT TTGTTTTGTTTCTAGCTTGATCAGCTTCTGTTCTTTGGAAAGGCTATGATTTTGGTATGGAGGAGGATGAGATTCAAGCACATGCAAGTAAGTTCCCAAG AATTGGAAATGGAAGAAATGATTCCTCTAACAAGATAGGTACTAGAGGAGGATTAGGGAGTGGTGAGCAACAACATCAAATATATGAGGAAGTAGATGGA GGAGGCTCAACAAACAGGTTCCACAGTTGGCACCACTCTTCAAGAATCATAAGGGTGTCTAGAGCATCTGGTGGGAAAGATAGGCACAGCAAGGTCATGA CCTCAAGGGGCTTAAGGGACAGAAGGGTTAGGCTTTCTGTGGCCACGGCTATTCAGTTCTATGACCTTCAAGACCGCTTGGGTTTTGACCAACCAAGTAA AGCAGTTGAATGGTTAATCAAATCAGCTTCTGATGCAATTTCTGAGTTACCTTCATTGAACAACACTTTCCCTGATACCCCTAAGGAACTGAGTGTGGGA ATTGAACAAGGATTTGATTCAGCTGAAGCAGAAATAGAAGGTAATACCAATTATCATAATCAGCAGCAGCATCAGCATAACAACAATCAAAGCCAGAACC TTTCTTTGTCGAAGTCTGCTTGTAGCAGCACTTCTGAGACAAGCAAAGGTTCTGGCTTGTCCCTCTGTAGGCCTGATGTACGCGTTAATCGCATCAAGGC CAGAGAGAGGGCAAGGGAAAGAACAGCAAAAGAGAAAGATAATGAAACTCTCAACAACAACATTGCTCATCATGTGAATATGAACAGCAACCCCATTTCT CAAACATCTTTCACTGAGCTACTCACAGGTGGAATCAACAATGCAGTGCCCACCACAACTAGTCCTAATAATAATGATTCAATTAGGAACCAAAACCAAA ACCAATGGTGTTCAACAGCACCAATGGATTACTTCACCTCAGGGCTTCTAGGACCTTCCTCTTCTTCAAGAACCAATACTTCTGGATTCTCACAGATTCA ATTAGGACATTCCCTTCCTGAGGCCATGCAAGTTTCACTTTCACCATTCAGTCTCAGTAGTAGTGATCATAATCAAAACCACTCATCAGACCAACAACTT CACCATCATTTATCATTCATTCATGATCATCTTATGCCAGCTATGGTTACTTCTTCTTCATCCTCTCATCAACATCATCAGCCCAATCATGACTATAATC TCAACTTCACAATCTCACCGGGCCTTGCTGGTTATAATAGGGGGACCCTTCAGTCCAATTCACCACCTCATATGTTGCCTCAACACAATCATATGCAGAG GTTTTCATCATCACCTATAGATGGATCCACTGTACCTTTCTTCATTGGAGCTGCTTCTGCTGCTGCTTCTTCAGCTTCAGCTTCAACCATGGAGAACAAT CATCACCAACAACAACTTCATTTTTCACCTATTTTTGATGGCCGTGGCTTGCAACTATGCTATGGAGATGGAACCAGGCATTCAGACCAGAAGGGAAAAG GCAAGAACTGAGTTTCAGGAACATTTCCTTCCTGGACTCGAAAGATAGAGAGTGCAAGCTGCAAGTTGTGTCACAAAAGCTTGGTGCCTTACCAAAAGGA GTGACAATGTTGTTATCAAGTGTTGGTTTTTCTTGTTGGGTCGTTTTGAAGTCACTCAATTACATCCAGTATTTTTTGATATAATATTTGATCTATGCGT GCAAAATCATTGTGTGTTTTGTAGAAATGTAAAAAATACTTGATTCAGGTTTTTATTTTGCTGAAATTCGTATTTTCCCTGGCTACTAATGAAGAGTTTT CACTCAATCGTGTCCATCCGATTTTCTTCACTAGTAAATTCTTTCAGGGTTAGATTTCTTCACTAGAAAACCTCTGTATACTTTAACAGATAAGCACAGT ACCTTGCACCATCCTTTTATAAGTTTTTTGTCACATGCTTTATAACTATCTACTTCGAATTGAAATAATGGCTTTCTCATTTGAGT
• Tissue: pods
• Gene name: LI_gene_165325;
• Additional information: details;

Expression of Ll_transcript_438226

FPKM

• PAB: 0.3
• PNAB: 0.3
• PS1: 1
• PS2: 0.1
• PS3: 0.5
• PW1: 0.4
• PW2: 0.2
• PW3: 1.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_438226

• Blastp: Transcription factor TCP2 from Arabidopsis with 40.84% of identity
• Blastx: Transcription factor TCP2 from Arabidopsis with 84.27% of identity
• Eggnog: Transcription factor(ENOG410YEYG)
• Kegg: Link to kegg annotations (AT4G18390)
• CantataDB: Link to cantataDB annotations (CNT0001483)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019464085.1)
• Pfam: TCP family transcription factor (PF03634.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;