| Id Trinity | TRINITY_DN48986_c2_g2_i2 |
|---|---|
| Name Transcript | Ll_transcript_435691 |
| Sequence | TTCGGGGTTCGTAACTCTTCCAATAAGTGACGCTCCCAGAAATCAAAACATCAACTTTGGAATCGAGTAGAGCCTTGCAAAGAGTAATAAGTTAATGATT AATGATGATCCAAAAGTTAGGGAAGTCCATATTAGTGGAGAAAATGTGTGAAGTTGGTGGTTTGGGAAGAAGCCACGTCAATGGAAATTTGGCATAAACT ACCAACCTTTTCACTGTTATCATCTCTTCATTCATTCATTCATTCATTCACAATTTTGATTCCAATCTTCTTCTTCTTCTTATTCTTCTTCTTCAATCTA ACAATATCATTATAATGGCAACAAAATTCCGCCATTTCATTCTCCCTCTTCGCTCCTATTCCACTCTTTCCAACCCTCCTGGGCCACTTGTGAAGTACAA AAGTCTAGTTAAGGAAGGGAAGTTGCAGCATGATCCTTTCCAAGAAGGTGTTGCTTCACAACTTCAGAACCTGCTTCAAAGGTTGGATCAATATGAGAAA CAAATGGAACAATATCATGTAAATCTATCAAATTGGGAGAAGAATCGAGAGAATGAGCGGCGAAGACTTCTCACGGAGGAAGCTGAGCTGCACCAGAAGG AAGAGGATTGGTGGAAAAGGTTGAACAGTAAACTTTCTGATAGATGGGTCTCCCGTAAAAGACCGAAAAATATGGAAGCCGGGGTAGGACAATGGGTTTC GTATCTTAAGCGTGAGAAGAAGTTGGACTCAGCAGTTGGTCAACGTCCAATTGCTCCTACATCCCCAAAAGGACTTTACATATACGGCAATGTTGGCAGT GGGAAAACTATGCTGATGGACATGTTTTATAGTGCCACTGAAGGAATTGTTAAACATCGAAGAAGGTATCACTTTCACGAGACCAGTGATACATATGATG AGCATGGTGCTGAAAGAGAGAGGAACATTCTGTATCCATATGTAGGCCATGCTGAAAATAAACGAACATATGCATAAAATATGGAAGAATCAAGTAGAAG AGAAGCCTTTGAAATCAAGCATTTCGAGTTGGATTATGAGTCTACCCTTCGACACAAAAGCTAAGGAGTGGCTTGCTGCAGAAGAAAGATACAATGAAGA GGTACATATGAAAAACATTCTTCCCGCCGTAGCAGATAAGTTTTTTCTGGATCAAGAAGAGGATGAAAAGGGAGCTAGCATTTTGTGCTTTGACGAGATA CAGACTGTTGATGTATTTGCTATTGTGGCTTTATCCGGAATTCTCAGCAAATTGCTGAATAGTGGAACTATTATTGTGGCTACCAGTAATCGAGCACCAG AGGACTTAAACGAGGCTGGTATGCAACGCGAAATCTTCCAAAAACTTGTCCGCAAATTGGAGAAACATTGTGAGAATGTATTGATAGGAAGTGAGATTGA CTACCGTCGCTTTATAGCACAAAGATCAATGAACCAGATAGAAGGAGAAAATAACCGGTCGCCTAGGATCGGTAGCTATTTCTGGCCTATTGAGATGGAC GCAATCAATAAATTTGAGGAAAAGTGGCATGATGTGACTAGCAGATTGGGAGGAAGAATAGTCTCCAACACCATCTCAGTGATGTTCGGAAGGACACTTG AGGTTCCTGAAAGTTGTGAAGGAGTTGCACGCTTCACATTTGAGTATCTCTGTGGTCGCCCGTTGGGTGCAGCAGATTATATTGCAGTAGCTGAAAACTA TCACACTGTTTTCATATCTGATATTCCAATGATGAGTATGCGCATCCGTGATAAGGCACGCAGGTTTATCACCCTTATTGATGAGTTATACAATCGTCAT TGCTGCCTATGTTGCTTGGCATCCTCTTCAGTTGATGAATTATTTCAAGGAACTGAGGAGGGCACACTTTTTGACTTGGAGAGTTTCCAGTTCGAAACAG AGACCGAAGGTGCGAAACTTCGCCGCGATGTCTTAGCAGAAGGCAATGTAGGCTCAGGAGGTGGCCCTGTTGGCATCACATCCATTCTATCTGGTCAAGA AGAGATGTTCGCTTTTCAAAGAGCTGTTTCACGCCTGATTGAAATGCAAACACCATTATACTTGGATGGAATCAGTAATTTCCACCCTTTTTTTCAGAGG CAACATTACAAATTATTATCAGAATCATCAATCTGAAAGTAAAGTTTTTTATTCTTCTTGGAGTGAAGTTGTTTTCTGATACATTTGTTTATAGAAATAT AGTGACAATATTGATTCTTTATACCTTACAGCTATATCCTAAATAAATGCCTAAGAAATTTGTATTTTTGGAAGTTCTAAATGTAAAATATAAGTCTCAA AGGGTATTTAATATTGCAGGTTTTAGTAGATTGTGAATTTGTAACTATGCAACTTCACCCTTTAGTTAACATGTTAAGAATGGAAGCATTCATGAGAAAG TTAGGGTAGCTCTTACGGTAGAAAAGATGATAAACTTGTGTCTTAGTTGGTTGTTTTGTTAAAGAACATGATTTATAATAGAACATTATTGCATCTTTCG GTTCA BLAST |
| Tissue | pods |
| Gene name | LI_gene_165591; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_435691
| Blastp | AFG1-like ATPase from Mus with 33.64% of identity |
|---|---|
| Blastx | AFG1-like ATPase from Mus with 33.64% of identity |
| Eggnog | AFG1 family ATPase(COG1485) |
| Kegg | Link to kegg annotations (215951) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019447543.1) |
| Pfam | AFG1-like ATPase (PF03969.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |