Ll_transcript_435692

• Id Trinity: TRINITY_DN48986_c2_g2_i3
• Name Transcript: Ll_transcript_435692
• Sequence: TTCGGGGTTCGTAACTCTTCCAATAAGTGACGCTCCCAGAAATCAAAACATCAACTTTGGAATCGAGTAGAGCCTTGCAAAGAGTAATAAGTTAATGATT AATGATGATCCAAAAGTTAGGGAAGTCCATATTAGTGGAGAAAATGTGTGAAGTTGGTGGTTTGGGAAGAAGCCACGTCAATGGAAATTTGGCATAAACT ACCAACCTTTTCACTGTTATCATCTCTTCATTCATTCATTCATTCATTCACAATTTTGATTCCAATCTTCTTCTTCTTCTTATTCTTCTTCTTCAATCTA ACAATATCATTATAATGGCAACAAAATTCCGCCATTTCATTCTCCCTCTTCGCTCCTATTCCACTCTTTCCAACCCTCCTGGGCCACTTGTGAAGTACAA AAGTCTAGTTAAGGAAGGGAAGTTGCAGCATGATCCTTTCCAAGAAGGTGTTGCTTCACAACTTCAGAACCTGCTTCAAAGGTTGGATCAATATGAGAAA CAAATGGAACAATATCATGTAAATCTATCAAATTGGGAGAAGAATCGAGAGAATGAGCGGCGAAGACTTCTCACGGAGGAAGCTGAGCTGCACCAGAAGG AAGAGGATTGGTGGAAAAGGTTGAACAGTAAACTTTCTGATAGATGGGTCTCCCGTAAAAGACCGAAAAATATGGAAGCCGGGGTAGGACAATGGGTTTC GTATCTTAAGCGTGAGAAGAAGTTGGACTCAGCAGTTGGTCAACGTCCAATTGCTCCTACATCCCCAAAAGGACTTTACATATACGGCAATGTTGGCAGT GGGAAAACTATGCTGATGGACATGTTTTATAGTGCCACTGAAGGAATTGTTAAACATCGAAGAAGGTATCACTTTCACGAGGCCATGCTGAAAATAAACG AACATATGCATAAAATATGGAAGAATCAAGTAGAAGAGAAGCCTTTGAAATCAAGCATTTCGAGTTGGATTATGAGTCTACCCTTCGACACAAAAGCTAA GGAGTGGCTTGCTGCAGAAGAAAGATACAATGAAGAGGTACATATGAAAAACATTCTTCCCGCCGTAGCAGATAAGTTTTTTCTGGATCAAGAAGAGGAT GAAAAGGGAGCTAGCATTTTGTGCTTTGACGAGATACAGACTGTTGATGTATTTGCTATTGTGGCTTTATCCGGAATTCTCAGCAAATTGCTGAATAGTG GAACTATTATTGTGGCTACCAGTAATCGAGCACCAGAGGACTTAAACGAGGCTGGTATGCAACGCGAAATCTTCCAAAAACTTGTCCGCAAATTGGAGAA ACATTGTGAGAATGTATTGATAGGAAGTGAGATTGACTACCGTCGCTTTATAGCACAAAGATCAATGAACCAGATAGAAGGAGAAAATAACCGGTCGCCT AGGATCGGTAGCTATTTCTGGCCTATTGAGATGGACGCAATCAATAAATTTGAGGAAAAGTGGCATGATGTGACTAGCAGATTGGGAGGAAGAATAGTCT CCAACACCATCTCAGTGATGTTCGGAAGGACACTTGAGGTTCCTGAAAGTTGTGAAGGAGTTGCACGCTTCACATTTGAGTATCTCTGTGGTCGCCCGTT GGGTGCAGCAGATTATATTGCAGTAGCTGAAAACTATCACACTGTTTTCATATCTGATATTCCAATGATGAGTATGCGCATCCGTGATAAGGCACGCAGG TTTATCACCCTTATTGATGAGTTATACAATCGTCATTGCTGCCTATGTTGCTTGGCATCCTCTTCAGTTGATGAATTATTTCAAGGAACTGAGGAGGGCA CACTTTTTGACTTGGAGAGTTTCCAGTTCGAAACAGAGACCGAAGGTGCGAAACTTCGCCGCGATGTCTTAGCAGAAGGCAATGTAGGCTCAGGAGGTGG CCCTGTTGGCATCACATCCATTCTATCTGGTCAAGAAGAGATGTTCGCTTTTCAAAGAGCTGTTTCACGCCTGATTGAAATGCAAACACCATTATACTTG GATGGAATCAGTAATTTCCACCCTTTTTTTCAGAGGCAACATTACAAATTATTATCAGAATCATCAATCTGAAAGTAAAGTTTTTTATTCTTCTTGGAGT GAAGTTGTTTTCTGATACATTTGTTTATAGAAATATAGTGACAATATTGATTCTTTATACCTTACAGCTATATCCTAAATAAATGCCTAAGAAATTTGTA TTTTTGGAAGTTCTAAATGTAAAATATAAGTCTCAAAGGGTATTTAATATTGCAGGTTTTAGTAGATTGTGAATTTGTAACTATGCAACTTCACCCTTTA GTTAACATGTTAAGAATGGAAGCATTCATGAGAAAGTTAGGGTAGCTCTTACGGTAGAAAAGATGATAAACTTGTGTCTTAGTTGGTTGTTTTGTTAAAG AACATGATTTATAATAGAACATTATTGCATCTTTCGGTTCA
• Tissue: pods
• Gene name: LI_gene_165591;
• Additional information: details;

Expression of Ll_transcript_435692

FPKM

• PAB: 33.2
• PNAB: 11.9
• PS1: 5.2
• PS2: 2.7
• PS3: 3.5
• PW1: 5.8
• PW2: 6.5
• PW3: 5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_435692

• Blastp: AFG1-like ATPase from Mus with 33.33% of identity
• Blastx: AFG1-like ATPase from Mus with 33.33% of identity
• Eggnog: AFG1 family ATPase(COG1485)
• Kegg: Link to kegg annotations (215951)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019447543.1)
• Pfam: AFG1-like ATPase (PF03969.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;