Ll_transcript_435706

• Id Trinity: TRINITY_DN48986_c2_g2_i6
• Name Transcript: Ll_transcript_435706
• Sequence: TTCGGGGTTCGTAACTCTTCCAATAAGTGACGCTCCCAGAAATCAAAACATCAACTTTGGAATCGAGTAGAGCCTTGCAAAGAGTAATAAGTTAATGATT AATGATGATCCAAAAGTTAGGGAAGTCCATATTAGTGGAGAAAATGTGTGAAGTTGGTGGTTTGGGAAGAAGCCACGTCAATGGAAATTTGGCATAAACT ACCAACCTTTTCACTGTTATCATCTCTTCATTCATTCATTCATTCATTCACAATTTTGATTCCAATCTTCTTCTTCTTCTTATTCTTCTTCTTCAATCTA ACAATATCATTATAATGGCAACAAAATTCCGCCATTTCATTCTCCCTCTTCGCTCCTATTCCACTCTTTCCAACCCTCCTGGGCCACTTGTGAAGTACAA AAGTCTAGTTAAGGAAGGGAAGTTGCAGCATGATCCTTTCCAAGAAGGTGTTGCTTCACAACTTCAGAACCTGCTTCAAAGGTTGGATCAATATGAGAAA CAAATGGAACAATATCATGTAAATCTATCAAATTGGGAGAAGAATCGAGAGAATGAGCGGCGAAGACTTCTCACGGAGGAAGCTGAGCTGCACCAGAAGG AAGAGGATTGGTGGAAAAGGTTGAACAGTAAACTTTCTGATAGATGGGTCTCCCGTAAAAGACCGAAAAATATGGAAGCCGGGGTAGGACAATGGGTTTC GTATCTTAAGCGTGAGAAGAAGTTGGACTCAGCAGTTGGTCAACGTCCAATTGCTCCTACATCCCCAAAAGGACTTTACATATACGGCAATGTTGGCAGT GGGAAAACTATGCTGATGGACATGTTTTATAGTGCCACTGAAGGAATTGTTAAACATCGAAGAAGGTATCACTTTCACGAGGCCATGCTGAAAATAAACG AACATATGCATAAAATATGGAAGAATCAAGTAGAAGAGAAGCCTTTGAAATCAAGCATTTCGAGTTGGATTATGAGTCTACCCTTCGACACAAAAGCTAA GGAGTGGCTTGCTGCAGAAGAAAGATACAATGAAGAGGTACATATGAAAAACATTCTTCCCGCCGTAGCAGATAAGTTTTTTCTGGATCAAGAAGAGGAT GAAAAGGGAGCTAGCATTTTGTGCTTTGACGAGATACAGACTGTTGATGTATTTGCTATTGTGGCTTTATCCGGAATTCTCAGCAAATTGCTGAATAGTG GAACTATTATTGTGGCTACCAGTAATCGAGCACCAGAGGACTTAAACGAGGCTGGTATGCAACGCGAAATCTTCCAAAAACTTGTCCGCAAATTGGAGAA ACATTGTGAGAATGTATTGATAGGAAGTGAGATTGACTACCGTCGCTTTATAGCACAAAGATCAATGAACCAGATAGAAGGAGAAAATAACCGGTCGCCT AGGATCGGTAGCTATTTCTGGCCTATTGAGATGGACGCAATCAATAAATTTGAGGAAAAGTGGCATGATGTGACTAGCAGATTGGGAGGAAGAATAGTCT CCAACACCATCTCAGTGATGTTCGGAAGGACACTTGAGGTTCCTGAAAGTTGTGAAGGAGTTGCACGCTTCACATTTGAGTATCTCTGTGGTCGCCCGTT GGGTGCAGCAGATTATATTGCAGTAGCTGAAAACTATCACACTGTTTTCATATCTGATATTCCAATGATGAGTATGCGCATCCGTGATAAGGCACGCAGG TTTATCACCCTTATTGATGAGTTATACAATCGTCATTGCTGCCTATGTTGCTTGGCATCCTCTTCAGTTGATGAATTATTTCAAGGAACTGAGGAGGGCA CACTTTTTGACTTGGAGAGGTAATTTTTTTTCTGTTTGTATCAGCTATATGGTGCACAATGAGCTTATGAATTACAACGTATGTGTTTTAGACATGCCCG AAAAGTGGATGACACTTTCAATTATGTTTTGTCACTTCATCTGTATCTAGTAATTCATTCTCAG
• Tissue: pods
• Gene name: LI_gene_165591;
• Additional information: details;

Expression of Ll_transcript_435706

FPKM

• PAB: 1.5
• PNAB: 0
• PS1: 0
• PS2: 0
• PS3: 2
• PW1: 0
• PW2: 0
• PW3: 0.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_435706

• Blastp: Putative ATPase N2B from Haematobia with 32.94% of identity
• Blastx: Putative ATPase N2B from Haematobia with 33.25% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019447543.1)
• Pfam: AFG1-like ATPase (PF03969.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;