Ll_transcript_435719

• Id Trinity: TRINITY_DN48986_c2_g2_i9
• Name Transcript: Ll_transcript_435719
• Sequence: TTCGGGGTTCGTAACTCTTCCAATAAGTGACGCTCCCAGAAATCAAAACATCAACTTTGGAATCGAGTAGAGCCTTGCAAAGAGTAATAAGTTAATGATT AATGATGATCCAAAAGTTAGGGAAGTCCATATTAGTGGAGAAAATGTGTGAAGTTGGTGGTTTGGGAAGAAGCCACGTCAATGGAAATTTGGCATAAACT ACCAACCTTTTCACTGTTATCATCTCTTCATTCATTCATTCATTCATTCACAATTTTGATTCCAATCTTCTTCTTCTTCTTATTCTTCTTCTTCAATCTA ACAATATCATTATAATGGCAACAAAATTCCGCCATTTCATTCTCCCTCTTCGCTCCTATTCCACTCTTTCCAACCCTCCTGGGCCACTTGTGAAGTACAA AAGTCTAGTTAAGGAAGGGAAGTTGCAGCATGATCCTTTCCAAGAAGGTGTTGCTTCACAACTTCAGAACCTGCTTCAAAGGTTGGATCAATATGAGAAA CAAATGGAACAATATCATGTAAATCTATCAAATTGGGAGAAGAATCGAGAGAATGAGCGGCGAAGACTTCTCACGGAGGAAGCTGAGCTGCACCAGAAGG AAGAGGATTGGTGGAAAAGGTTGAACAGTAAACTTTCTGATAGATGGGTCTCCCGTAAAAGACCGAAAAATATGGAAGCCGGGGTAGGACAATGGGTTTC GTATCTTAAGCGTGAGAAGAAGTTGGACTCAGCAGTTGGTCAACGTCCAATTGCTCCTACATCCCCAAAAGGACTTTACATATACGGCAATGTTGGCAGT GGGAAAACTATGCTGATGGACATGTTTTATAGTGCCACTGAAGGAATTGTTAAACATCGAAGAAGGTATCACTTTCACGAGGCCATGCTGAAAATAAACG AACATATGCATAAAATATGGAAGAATCAAGTAGAAGAGAAGCCTTTGAAATCAAGCATTTCGAGTTGGATTATGAGTCTACCCTTCGACACAAAAGCTAA GGAGTGGCTTGCTGCAGAAGAAAGATACAATGAAGAGGTACATATGAAAAACATTCTTCCCGCCGTAGCAGATAAGTTTTTTCTGGATCAAGAAGAGGAT GAAAAGGGAGCTAGCATTTTGTGCTTTGACGAGATACAGACTGTTGATGTATTTGCTATTGTGGCTTTATCCGGAATTCTCAGCAAATTGCTGAATAGTG GAACTATTATTGTGGCTACCAGTAATCGAGCACCAGAGGACTTAAACGAGGCTGGTATGCAACGCGAAATCTTCCAAAAACTTGTCCGCAAATTGGAGAA ACATTGTGAGAATGTATTGATAGGAAGTGAGATTGACTACCGTCGCTTTATAGCACAAAGATCAATGAACCAGATAGAAGGAGAAAATAACCGGTCGCCT AGGATCGGTAGCTATTTCTGGCCTATTGAGATGGACGCAATCAATAAATTTGAGGAAAAGTGGCATGATGTGACTAGCAGATTGGGAGGAAGAATAGTCT CCAACACCATCTCAGTGATGTTCGGAAGGTATCTGTTAGAAAACAGTAGAAAAATAATCAATTTGATACTATTGCTAGAAAACGGTAGGGAAACAAGGAA CTAAGCTCCAATTACAATGGTAGGAAACAGAAAAATAGAGACACAAGCAATTGTAAAAAGAAGAATTCAGAGAAGCTAGTGCTGTCTCTGCCCAAGGCCT AAGCCATCCCAACCCTTTCCGAGTTTCTGAATACCCTCCAATAAGTCCTCTCGCCCCCGATTTGTTACCCACTAATACCTCTTAATTTGCCCATTTATCT TCACCGGCACTCACTTTAATTACTGCACACTTGTAATTCTTATCCACTAGCTATAACTGTTGCCTACTACTGCCCCTCTTAACTTCTCTGTTATACACAT GCTTAAATATGGTTCTATAAGTATCCTATTTATATTTAATGTCGTCAAACAAGATACATAGTCGTATGTAATTTCTTTCTACAACAGGACACTTGAGGTT C
• Tissue: pods
• Gene name: LI_gene_165591;
• Additional information: details;

Expression of Ll_transcript_435719

FPKM

• PAB: 1.3
• PNAB: 0.9
• PS1: 0.7
• PS2: 0.2
• PS3: 0.3
• PW1: 0.4
• PW2: 0.2
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_435719

• Blastp: AFG1-like ATPase from Rattus with 37.63% of identity
• Blastx: Putative ATPase N2B from Haematobia with 31.63% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (502479)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019447543.1)
• Pfam: AFG1-like ATPase (PF03969.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;