Ll_transcript_329526

Id TrinityTRINITY_DN49038_c4_g1_i3
Name TranscriptLl_transcript_329526
SequenceAAATAGTTTAGATTTACTACTAATTCAAATCATTAGATTTCTCTATAATTGATGATTAAGATAATGAATAAGTATGTTAAACTTACTCTTGAAGTAAATT GATATTTTTAGTATAAAGTATAAATCATTTCCTATTTGAATATTATAAGAACGCGCATTAATCCATTTGTGGCCAACTTCATTTATCCCCCATTGCCATT ATATTATGATGACATATAAGGTAAAAGGAAATGTATCGCTCTTCTATTGTAGGAGTAGTAACAGTTCCAAGATTTCATATGTAACATTCAAAATTTAACA TCTTCCACTTCGATATTAAGGGCACAGTTCATATAAAGGTTTTGCATTAACAGAGTAAAGTCTTTTGAATGTAATTTTTATTGTTTATGTATAAATAATA AATGATAGATTGATAATGTGAAAAATCTGTAGACTATTGCTGATGGACATCCATTATTCCATTAAACTTATAATATATACTAAATGCATAGCTCAGTGCA CTATTCACCAATGTGGAACCATCGATATCTTCAATTTTGACAAGAATGCTGATACTTCAAAGTTTTTGATGAATAAACTTTATTATTTAGATGACACATG ATATTAGAACACCAAATCATAACTATACTAAATAGATATATACCTCTTTATGCCACGATGAATAATAATATTGGATCTTATGCAATGTTTTTCCTTAATA CCTAATTCAAGGGTGTACATATGTTGCTCCATATTCAGTGTGTGCTATGGTCTTGCGATTGATTGAAGAAAATATATTTAAGTTAAAATTTAATTTTTAA GTAATTTTCTAATTAATGACAAAATCATAACACATGAAGTGACAATAAGTGTGAGACACCAGATTTGTACGAGAACAATAGCGATAAGATGAAAAAGTAC ATACATGTCTTGTATGTGCATATAGCAATTTGTAATCCATTGGGCCTATATGAAGATGTAAAGTCCATTTACTATTGGATCATAATAAGATGAACGAATT TGTTGTATATCACAATTCACAACTCCATCGTGTTGAAACAAAACCACATTCCTCCACTGTTGTTGTCTTGTACCTCCTAAATTTATCCGTAGGAACACTT GTTCCACTTTGTTCTTTGTTGTTTCCACTTTCCAATTAATACACCATGGCTTCTTCTCTCTTATTACCACTCTCTACCCCTTCTGCACCTTTCTATCTCT TCGATAATTCTGCTGCCAAATCTTCTTTCCTTCATAGTACCACAAACCTCTTTCCTTCTTTTCCCAAATCCACGACCAAAGTGTCACGCAGGTGCTTCAT TTCTCCTTCTGCCAAATCCTCCTTCGACCATATTCCGAAGCAGTTCAGGAAGGATAATCTCAAGGATGGAATGATGGACAACTACAAGAATGCACCTCAA TATCTATATGGCCTGAGTCCTTCACAGATAGACATGTTCATGACAGAGGACAACCCTATCCGTCAGCAGACTGAAAGAGTTACAGAGGAGAGCATCTCAT CTGCCAAGAATTATTTGGATCACGGTGGCATGTGGTCTCATTCTTGCATGGGCAATAATGGTCCTTCAAAATACAGCATGAGTGTTAGTATGTATCGAGG AGGAGGAGGAGGTAGGGGAGCTGGAAGGCCAAGAACTGCTCCACCAGATCTGCCTTCTTTGCTCTTGGATGCTCGTATATGCTATCTGGGTATGCCGATT GTACCAGCTGTGGCAGAGCTTCTTGTTGCTCAATTTATGTGGTTGGATTATGATAACCCTAAAAAACCTATATACTTATACATTAATTCATCTGGCACTC AGAATGAGAAGAATGAGACTGTGGGATCAGAAACTGAGGCATATTCCATTGCTGATATGATGTCTGTAAGTTTCTATCATGAATCATTTGCCCGCTTGTA AACCCACCCCGAGGCTGTGGTATGGTTTACCTCTTTGAACTTATCCTTGTAATCCAAGGTTTTGATTTATCATTTTTCCCTTTGCGTGAAGTATGTCAAA TCGGATGTCTATACTGTGAATTGTGGCATGGCATATGGTCAAGCTGCAATGCTTCTGTCACTTGGAACAAAGGGTTATCGTGCTTTACAGCCAAATTCAT CAAGTATGAATTATATCTCTGCAAACCTTTGAAATTTTTGCTTGATTGCTTTCACTCATTTACTGTGACCTTTCAAACTTCTGATAAATGCTTCCCTCTA GATCCCTTACTCTGTATCTCGTTCCCGAGTATATTAGGAGAATGTGCTACTGAATAATAATTTTACAATCATCCACGTTGTTGTCACACAGTACATCTTT TGATCAAATGCTGCTAATATATCTGTTAAGGAGTATTTTCTAGAGGATTAGTTTATCAAATGCCTAGTTCTTCTGGAGCCTGAGTGTAAGAAGGGTAGAG TTATGATCTGTGTAGTTAAACAACCATACTTGATATTCTGCATTGAGATTTGAAACTGTTAGGCTGCCATAGGACTTCTGAAAAAGTAATCCCGGTTTTA ATGGAACAAATGAAACAACGCCGATCCTTATCTATTGCTATTATCTTCTGCAATATGCTATAAAAAAACATGGCCTACATGGCAATTGAATGAAAAGCTA TAGCAGGCTCTTTAATTAGCCATTGTTTTTCCTGTTTATGTGTGGCTTTCATATTAGTTATCCCAGAACATGACTAGACCCCAATTTAGTTATGTTAGGA TGACTTGTGGTGGGATGGAATGGCATTGTTTCCAAGCTGTTGTTTGGATATTTAGGACGGAATGAAGGAATGTTTCCATTACATATTTTGTAAGTTCTAG TGAAATGGAATTAGTTATAAGCATTATGTTCCTATGCCATTCCAGTCCTTAGGGGGTAGGGGTGGAATGAATGCCACCCCATGTATTTCCATCCTAGTGT TCAATAAGTAAACATTGGTACTCAAGCTCATTCCAATTCCATTGCTTTCTACCAATCCAAACATACCCGAAGTTTGTGGTACTGTTGTCTATTGTGGACA TTTTCTTGTTACTACAAAACAATGATAATTTGGGAAATAAAATTGAAATGTGTTTCAACTGGACTGCATACAGAGCCTTCTTTCGAGGCTATAAATTTCT ACATTGGGATATTTCCTAATTGTCAATTGATGCCTTTGAAATGGAGTAGAAGGTTTTCTACCAAAAAAGGAAGTTGAAAGATAAATAATCGGATGCTTTG TATGGATTATGTGGAATATCATGATGCATGATTTTTAGGTGCGGCCTTCTCTTACTTTTACTTGTAAACTGCTTTCAATTGCAGCAAAGTTGTATCTCCC AAAAGTCAACAGGTCAAGTGGTGCTGTTATAGATATGTGGATTAAGGCAAAAGAGCTGGAGGCAAATGCTGAGTATTACATTGAGTTGTTAGCAAAAGGA ATAGGAAAATCATAAGAAGAAATTGCTAAAGATGTCCAGA BLAST
Tissuepods
Gene nameLI_gene_166028; 
Additional informationdetails; 

Expression of Ll_transcript_329526

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_329526

BlastpATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic from Arabidopsis with 65.06% of identity
BlastxATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic from Arabidopsis with 62.38% of identity
EggnogCleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins (By similarity)(COG0740)
KeggLink to kegg annotations (AT1G49970)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019428782.1)
PfamClp protease (PF00574.22)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;