| Id Trinity | TRINITY_DN49053_c6_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_330590 |
| Sequence | ATTTTTTTAAAAGAAGTTTAAATTGGAATGTTGGTTCACTTCCCAAATTACTTATATTTAATACGCCATATCAAAATTTCTGGAGTTCCGATTCTTCATT TAATTAAGACTGTGAATCATAATCGTTTTGAAACATAGTGAGATACTAGCCGCATTGACATTAGGATATGCCATAAGAAATCTTACTTGTAGTTTCCAAA AAGACAAATAAGGTACTCAAATTTTCTAGAGTGTGACTTGGTTCATGAATTTCATTATAAAAAGCTAAGCCGCACTTTATGCAAGTTGCATGTGAAAATG TCATAATTTACAATTGTTGACTCTATAATATAATGCATTATTTCTACGAAAGGTAGCTAAGGAACAAAAATGAATTATTTGTATACATGTTACACATGGG GAAAACGAATCCACACTTAGCTCATATGTAAAGGTTGGGTGAGATTTGATTCCAAGACTTTGTAATAATCTCACATGAGAAATTATTTTCCTATATAGAA ATAGTTATATTAACCAATGTTGGAAAATTTCCTCATTATTCTTTAGGATCTGACTCATTTTATTCTTTATTCAAACTTAACAAAAATTATAGGATTAGAA GTTGATAATCTAAGGTGGAGCTAGAGTTTAACCACAAAACAACATATTAAGTAACAAACAATATGAAGTGAAAAAAAAAATTGGTCTAGTAGTGTAAGAT GTTACTGGGTCTCCAAGTATCGTGCTAACTTAAAGGTGAAAAGTTCGATTCCTGATAGAATATTTGTTGGGAGAGACAATCCCATATCGTAAAAGATTTC CTTATCTTTATGGAATACAAAAGGGAAGAAAAGGAATGAATGAAGGAGGGCATTCCTTTATGGAAAAAAAGAGAGAAGAAATAATCAAACCTTGCTTGGC CTCTCTTTATGAAAAAAAGGAGTCAACGATTGATGGGTTGACCTTGAAAAATGTGTGTAACTAGAAGCAATTAAACATTATACATATATTATATTAAGTC AAAATATGAAAACAATTATGAAATTGAAAATGTCAATATGATTGAATCTTGATTAGGTCTCTAAGTTACTTTGTACCTAACATAATATACTTACCTTATG CCAGGGTTGACAAGAATGCTGATGGAAGAATTACTGGAGAAGAAGTTCAAGAGATTATTGCATTAAGTGCTACTGCTAATAAGTTATCAAAAATACAAGA ACGAGCAGAGGAATATGCAGCCCTTATCATGGAGGAGTTGGACCCTGACAACCTTGGCTTCATTGAGTTATACAACTTGGAAATGCTTCTTCTACAAGCA CCAGCACAATCAACTCACATAACCACTGATAGTAGAGTTCTGAGCCAAATGTTGAGCCAAAAACTAGTCCCAACCAAAGAGTACAACCCTATCAAACGAG GGTTCAAGGCACTGGCCTACTTTGTGGAGGACAATTGGAAAAGAATTTGGGTTATAGCACTTTGGCTTTCAATTTGCATTGCACTTTTCACTTGGAAGTT CATACAGTACAAGCATCGTGCAGTGTTTCATGTTATGGGTTATTGTGTCACAACAGCAAAGGGTGCTGCTGAAACCCTAAAGTTCAACATGGCCTTAATC CTCTTACCTGTGTGTAGAAACACCATCACTTGGCTCAGGAGCAAGACCAAGTTAGGAATGGCTCTTCCTTTTGATGACAACATCAACTTTCACAAGGTGA TAGCTTTTGGCATTGCAATAGGGGTAGGGTTGCATGCTATTTCACATTTAACCTGCGACTTTCCAAGGTTACTGCATGCAACAGACTCAGAATATGAACC TATGAAGCCATTTTTTGGTGATGAGAGACCCAACAATTATTGGTGGTTCGTGAAGGGAACAGAAGGTTGGACAGGTATAGTCATAGTGGTGCTTATGGCT ATAGCATTCACTTTGGCTCAACCATGGTTCCGTAGAAACAGATTAAACCTTCCAAAAGCTCTAAAGAAACTCACTGGTTTCAATGCTTTTTGGTATTCTC ACCATCTCTTTGTCATTGTCTATGCCCTTTTTATCGTTCATGGATACTACTTATACCTCTCCAAGAAATGGTACAAGAAAACGGTACGTAAATAAATATA TATATATATACACACACACACATGCTATATATATTATAACCTATAGTTTTTTTTCTTCATTTTTTCTTCTGCTTCAAATTTTGTTCTTGTTTTCTAAACT TTGTTTCACAAAATTTATAATGCAGACATGGATGTATGTTGCAATTCCTGTGATCATATATGCTTGTGAGAGATTACTTCGTGTGTTTAGGTCTGGCTAC AAAAGTGTCAAGATTTTGAAGGTTGCAGTGTACCCAGGAAATGTATTGGCCTTGCATGTGTCTAAACCACAAGGATTTAAATACTCTAGTGGACAATATA TTTTTGTTAATTGTTCAGATGTCTCACCATTTCAATGGCATCCTTTCTCTATTACATCAGCTCCTGGAGATGATTATGTAAGTGTTCACATTAGGACTTT GGGTGATTGGACATCACAATTGAAGGCTGTTTTTGCTAAGGCATGCCAGCCATCAAGTGTTGACCAAAGTGGTCTTCTAAGAGCTGATATGTTACAAGGC AACAATATACCAAGGATGCCAAAACTGATGATTGATGGTCCTTATGGAGCTCCAGCACAAGACTACAAAAACTATGAAGTAATCCTTTTGGTGGGTCTAG GAATTGGAGCTACACCTTTGATTAGCATACTAAAAGATGTTCTAAACAACATTAAACAACAAAAGGACATAGAAGAAGGTGATGTTGAAAGTGGAGTTAC AAACAACAAGCGAAAACCTTTTGCAACTAATCGAGCTTATTTTTATTGGGTTACTCGCGAACAAGGTTCATTTGAATGGTTCAAGGGTGTAATGGATGAG GTTGCTGAGTATGATAAGGATAAAGTAATTGAACTTCATAATTATTGTACAAGTGTGTATGAAGAAGGTGATGCAAGATCTGCATTGATTACAATGCTTC AATCTTTACACCATGCAAAAAATGGTGTAGATATTGTTTCAGGCACAAGGGTCAAGACACATTTTGCTAAACCAAATTGGCGTAGTGTCTTTAAACATGC AGCAGTTAAACACCCTGGAAAAACAATTGGTAAGTCTTCATTTTCCTCTTAATTTAATTAATTGTTACGTGTTGTTGGTCTAGTGTTATAAGGCTTTATT GGATCAAAGCAGTGTTTTAAATTGCGGTTGCGGTAACGGTTGTGGTTACTGCGATTATGGTCATTGCGGCCGTTGCGGTGTGAATTACGTTGTGAGTAAA AACATATTTTTGAGATCGATGCATCCTGATGCAGCCCGATGCGGTCCAAATGCGGTTGTGTTGCGGTCGCGTTACTGTGATTCGGTATCACATGCAATTG CAGTGTGATGCGGTTGCGACGGTGTTCGCAACCGCAATATTGCGGTGACATCACCTGATGCGGTTCGCAATTTAATACACTAAATCACCCCGAAAGAAAT TCCTAAGCTCATTTTTGTTTTTGTATTTTTATTTTTCAGGTGTGTTTTATTGTGGGGCACCAGGACTAGTTGGAGAACTGAAAAGGCTTTCTCTAGACTT TTCTAGAAAAACCAACACTAGATTTGATTTTCATAAAGAGAACTTTTAGAATATTCTTTTCTCATGGTTCTACAATTATTTTATCCAACTACAATTATAT ATAGTTAGAGGAAATTTAATCAAGTTATGTATAATTTATAAGTACAGCATATATAGTTAGTGGAATTTTATCAAGTTATATATAGTTGTTGCTTTTCCTT TCAGAGGTAGCTGTATTTGAGTAACTAAGTTGTATGCATGTATTAAAAATGTATTCACTTTGTTGTAAAGCGAAGTCATTATTTTGATTAAGATGTTCAT ATCATATTGATTATAGTAACATAAGAGTTCAAATTTTGTAAAGCCGAATAAACAGACTTATAGAAAAAAGGCGCTATAAATATTTCGAAAAAAACTAGTC TTACTGAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_166176; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_330590
| Blastp | Respiratory burst oxidase homolog protein B from Solanum with 70.85% of identity |
|---|---|
| Blastx | Respiratory burst oxidase homolog protein B from Solanum with 82.11% of identity |
| Eggnog | NADPH Oxidase(ENOG410XNZY) |
| Kegg | Link to kegg annotations (102603596) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019440572.1) |
| Pfam | FAD-binding domain (PF08022.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |