| Id Trinity | TRINITY_DN49094_c2_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_329806 |
| Sequence | TCTATATATATGTCTGTATGTATTTTCTCTCAATTTTTCATTCACTTTTTGCTCAAGAAAGAGAGAGTATAGGAGCCAAAATAGAGAAGAGAGAGAAAAG AAGAAATATATTGATATAACAAAAGAATGCATGAGATTAGGAAGGACCACCAGAACATAAGGCTTTTTGGTAGAATTATTTCTCTGCCAAGCAACAGCAC CAATGATTCTTCTTCTGAACATGCTCCTTCTCTTCTACCTCAAGATCATAGTCCTCCTTCATCTTCATCTTCTCCACGTGAAGCGATCTCTGCAACAGAA CATGAAGCAGAAACTTATAAGGAACCATCAACTAAAGAACTTGCAACAGATCAAGATGATGAAGCCATAGTTCAAACCAAAAAGGATTTAAAATCTCCTA CATCTTCGGGCATTTATGAGAACCCGAAGACTCCCTCTGCAGAAAGAGAGACTTCTATAGCAAAATCCTCTAAAAATGGAGAAGAAAGCGAGACAAGTGT GTCGCAAGACAAAACTCTAAAGAAACCAGACAGCATACTTCCATGCCCGCGATGCAACAGCATGGACACTAAGTTTTGTTACTACAACAATTACAATGTC AACCAGCCCCGTTACTTCTGCAAGAAGTGTCAGAGATACTGGACTGCTGGAGGAACCATGAGAAATGTTCCCGTAGGCGCAGGTCGCCGCAAGAACAAAA GCTATCTATCTTCTGCCGCACATTATCACCAAATAATAGTTCCTGAGGCTCTTCAAGCAGCTAAACTCGATGGATTACACAATGGTATGTTAGGAAATGG AGCAGCTGTCTTGACTTTCGGATCAGATTCTCCTCTTTGTGATTCCATGTCTTCTGTCTTGAGCCTTGCTGAGAAAGCACAAAATGGTGTAGTCCTAAAT GGGTTTCACGCACCAAACCAGAATGTTTTCGTTCGCTATGATAAAAAAGAAAATAATAACAATAACAATGAGGGTGATAACTTAGTTGCAGCTTCTGTTT TGGATTCAACTTCATCTGAGAACAAAGGGCATGGTGTCTCACATGAACCAATGAATAAGAGTCATCAAGGTTTCCCTCAATTTCCATGCTTCCAAGGTTC TTCTTCACCTTGGCCTTATCCATGGAATCCTGCATGGCCTCCTCCTCCATTTTCCCAACCATGTTATCCGATGGCATTCTATCCTACACCTGCATATTGG GGTGTTAATGTTATGCCACCTCCAACTTGGACTGCACACCCTATCTCTCCTCAATCCCACTCTACTACTTGCTCTAGCCCAAACTCACCTACTTTGGGGA AACACTCAAGGGATGGGAATATCATATCCCAAACCAATTCACTGAAAGAAAAGACAGGCCCAGAAAGTAGTGTCTTGATTCCCAAGACACTGAGAATTGA TGATCCTGGTGAAGCTGCTAAGAGTTCTTTATGGTCAACACTAGGGATCATGAATGAAGGAGGAGGAGGAGGAGGTCTTTTCAAAGCATTCCCTTCATCC AAGGGTGGTGACAAGAATCATGTGGTTGAAGCATCACCAGTGTTGCATGCAAATCCTGCAGCATTATCAAGATCTCTTATCTTCCATGAGAGAACCTAGT TGGAAAATTACAGTGAGCAACCTACATGCAGATTTGAAGTAGGCCATACCAGTACAACCTCACTATAGTGACATGCTTTTGCTTTTCTGCATGATAAGTT GTATTATTGACCAAATTCAATGCAGGGTTTCTAGGACAACAAGATTGTAGTTTAGCACTAGAGCTTCCTTTACTTGCCATCTTGAGCCTGTCAAAGTGAA CAGGTGTTTTTCAAGATTTAGATGAACTGTTGAGTAAATGTCTTTGATGTACATATATATGTCAGACAAGGAAAATAATGAGAAGAGACAAAAAGTAAAG CAGATTCTTGGACTAGAATCCAAAGGTTTCTAATAAACTTGTAAGTCATTACCTCTTGCTGCAGCCTTATCTTTTTTGAGTAGATTCACT BLAST |
| Tissue | pods |
| Gene name | LI_gene_166504; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_329806
| Blastp | Cyclic dof factor 2 from Arabidopsis with 41.96% of identity |
|---|---|
| Blastx | Cyclic dof factor 2 from Arabidopsis with 44.75% of identity |
| Eggnog | zinc finger protein(ENOG410YN7N) |
| Kegg | Link to kegg annotations (AT5G39660) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019454562.1) |
| Pfam | Dof domain, zinc finger (PF02701.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |