Ll_transcript_293054

• Id Trinity: TRINITY_DN49111_c0_g2_i3
• Name Transcript: Ll_transcript_293054
• Sequence: GAATATGTTTGAATTGCATAGCACATTAACAATTGATCTTATATTATTGGAGACTTAACTAGTGCTACTTATGGCAACAAATGGATCATCAAATTTCAGC TTTTCAAGAAGTTATAGTACCAATTCTAGGCTTCCCTTAATTCAAACCCGTATTCCTGAGACAGAAGCTGTGTGCCATGATGATAGCACTCACCCTGTTA AAGCTCAAACCATTGATGAGCTTCATTCTCTTCAGAAGAAAAAAACATCAACTCCTTCCACCCCTATTAGATCACCTCTCGGTGGTTCTTTTTCCAATTT GAATGATCTCGAACGCCATGCTCAGAAACTTCAATCTATCAGTGCATCTTTGGCTTCATTAACGAGGGAGACAGGGCCTAGGGTGGTGAGCGGAGACCCA GCCAGCAAGGGCACCGAGAGCCCGAATAAAGGGAGGGCGGCGGCAGCGGCCGCCGTCGATCAACACCACTTACATCATGGTCCTCCAACGTTTAATGTCA GTGATAGTGCCCTCAAATTCACCCACGTCCTCTACAACCTCTCCCCTGCTGAGCTTTACGAGCAAGCGATTAAATATGAGAAAGGATCATTCGTGACATC AACCGGCGCGTTAGCCACGCTTTCGGGAGCGAAGACCGGTCGATCTCCCCGTGACAAACGGGTTGTGAAAGATGAGACCACTGAGAATCAGCTTTGGTGG GGAAAGGGATCACCCAATATTGAAATGGACGAAGAGACATTCTTAATCAACAGAGAAAGAGCTGTTGATTACTTGAACTCCCTTGAAAAGGTTTTTGTGA ATGACCAATTTCTGAATTGGGATCCAGAACACAGAATCAAGGTCCGAATTGTGTCCGCAAGAGCTTATCACTCCCTATTTATGCACAATATGTGCATTCG ACCCACTTTTGAAGAACTAGAAGAATTTGGAACTCCAGACTTTACTATATACAATGCTGGACAATTCCCATGCAACCGTTACACACACTACATGACTTCA TCAACTAGCATAGACATTAACCTATCAAGGAAAGAAATGGTTATCCTTGGAACACAATATGCTGGAGAAATGAAAAAGGGTCTCTTTAGTCTAATGCATT ATCTCATGCCCTTGCGTAATATTCTCTCCCTACACTCTGGCTGCAACATGGGCAAAGAAGAAGATGTTGCACTCTTTTTTGGATTATCAGGTACTGGAAA GACGACTCTTTCGACCGATCCTAATCGATATTTAATTGGAGACGATGAGCACTGCTGGAGTGAAAATGGGGTGTCCAATATTGAAGGAGGTTGCTATGCA AAGTGTATTGACCTTGCAAAGGATAAGGAACCAGAAATCTGGAATGCAATCAAATTTGGAACTGTTGTAGAAAATGTTGTCTTTGATGAGTATACTCGAG AAGTAGATTATACAGACAAATCTGTAACTGAGAACACTCGTGCAGCATATCCTATTGAGTACATACCCAATGCTAAGATACCATGTGTTGCTCCCCATCC AAAGAATGTCATCCTTCTAGCTTGTGATGCATTTGGTGTGCTGCCACCAGTAAGCAAGCTGAGCTTGGCCCAAACCATGTACCATTTCATCAGTGGCTAC ACAGCCCTGGTTGCTGGTACAGAAGATGGTATAAAAGAGCCACAGGCCACATTCTCTGCTTGTTTTGGGGCAGCATTTATAATGATGCATCCTACCAAAT ATGCAGCTATGCTGGCTGAAAAGATGAAGCAGCATGGAGCTACAGGATGGCTTGTCAATACTGGCTGGTCAGGAGGAAGATATGGAATAGGCAACCGGAT CAAGTTAGCTTACACCAGGAAAATCATTGATGCCATTCATTCTGGTACCCTTTTGGATGCTGAGTACGCTAAGACGGATGTATTTGGGCTTGAGATGCCA ACAACATTAGAGGGTGTCCCTTCTGAAATCTTGAACCCTGAGAATACTTGGTCTGACAAGGAGGCCTACAAAGAAACATTATTGAAATTAGCAAGTCTAT TCAAGAATAATTTTGAAGTATTCGCCACCTACAAGATAGGGGAAGATCAGAGCTTGACTGAAGAGATTCTCTCTGCTGGTCCGATCTTCTAAAGAGAGTA CTTCCAGTTCAATAAAGAAATGGACACAGAAACAACAATTGATTGATGATGTGTTTGCTATTACCACATCTCAAACATGAAGTTTAAAAGCATCCCTTTA GTAGTTTCCATGTGAGGATTTTTGTTTTTTAGTTGGCTTGACTATAATATAAGACCATCCCTTCTTTTTATTTAACTTTCTGTCCAATTTGTTAATTTGT GTGTGTACTTTATTGTGATATGAGAATTTGCTACTTCCCCTTCTTTTTTGCTGCCTTGTTTCAATTGTCAAGCAAAAGATTGAGACATCTGAAAGAAAGA TGAAATTAACAAGGTGCTTTACTTGACAAGTTAAAAACCTTAAAGCTCATTTGTATATTTAGGAGCAATTTGAAAGAGCTTATAAAGATTTAATTTGTG
• Tissue: pods
• Gene name: LI_gene_166658;
• Additional information: details;

Expression of Ll_transcript_293054

FPKM

• PAB: 8.3
• PNAB: 0.6
• PS1: 0
• PS2: 0.9
• PS3: 1.3
• PW1: 0.2
• PW2: 0.9
• PW3: 1.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_293054

• Blastp: Phosphoenolpyruvate carboxykinase (ATP) from Arabidopsis with 78.45% of identity
• Blastx: Phosphoenolpyruvate carboxykinase (ATP) from Arabidopsis with 80.81% of identity
• Eggnog: Phosphoenolpyruvate Carboxylase(COG1866)
• Kegg: Link to kegg annotations (AT4G37870)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019417921.1)
• Pfam: Phosphoenolpyruvate carboxykinase (PF01293.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;