Ll_transcript_293283

• Id Trinity: TRINITY_DN49142_c2_g2_i21
• Name Transcript: Ll_transcript_293283
• Sequence: AAATGATGAATGACTGACCGTACAAAAATGGAGGAGATTTATTTCTATTTTGTTAATAACATCATGGTATTTGGAAGGAGGGTTTGAGAAGTAGGAAGTA ACAAAAATAGCATAGCAATGATGAAAACAACGAAGAAACAACGAGGATGGGTTACTATGTTCATGTTTCTCTCTTTCCCTTTGGTTTCGTACGGAATTGT ACAACCTCGTACGTTGCTCAATTACTTCTCTGAGGGTAAAAGACTCAACACTCAAGAGCTCTGGTTCAATCAGACTCTCAATCATTTCTCTCCCTATGAT CACCGTCAATTCCCTCAACGCTACTATGAGTTCCTCGACTATTACCGTATTCCAGATGGGCCGATTTTTTTGGTAATCGGTGGTGAGGGTACGTTAACTG GGATAGCAAATGACTATATTGCTGTACTGGCAAAGAAGTTCGGAGCAGCTTTAGTTTCTCTCGAGCATCGCTATTACGGAAAGAGTACTCCATTTAAGTC TCTTGAGACAGAAAATCTGAAATATCTATCATCCAAGCAAGCACTCTTTGATTTGGCTGTTTTTCGCCAGTATTATCAGGATTCCTTAAATACAAAGATT AATAGAACAAAAGTCGAAAATCCGTGGTTCGTTTTTGGTGGCTCATATTCTGGGGCACTCAGTGCATGGTTCCGTCTTAAGTTTCCTCATTTAACATGTG GAAGTCTTGCAAGTTCTGCAGTCGTTCTTTCTGTTTATAACTACACGGAGTTTGATCAACAGGTTGGTGAGTCAGCAGGTGCTGAATGTAAAGCAGCATT ACAAGAAACTACTCAACTTATTGAACAAAAACTGGCAACCAATGCAAAGGCATTGAAGAAATCTTTTAATGCAGCTGAACTTCAAATTGATGGTGACTTC TTGTATTTTTTAGCTGATGCTGCTGCTACATCGTTTCAATATGGAAATCCAGATAAAGTATGCAAGCCTCTTGTTGAAGCAAAGAAATCCGGAGAGGATT TGGTGGTATGCTTTTCAATCTGGCTTCTCCTTACGATAGAATATTATAAAACTGTTACGTAGAGGCCTTTTGTAGATTGAATCTATTATTTTTCGTATTT TTCTGTTCACTTGCATTGCAGTTTTCACAGGAATTACATGGCAAATTAAAAACACCACACTCAATACCTTGGAGTGACCGGTGTTCTAAGTCATAGTTAA TAATTATGTGCCGATAATATATTCGTTCCCTTCATGAGATGCTCCCTATGGTGCAGGGTTAAATCTAACCATCATACCCGATCTATCAACACAACACAAG CCAACACAATGTTTGGTATTTTAATATTGAGTTTGATATTTTATCATACATGACTTCTCCGGATTATGATTGTCGTAGTATGCTCATCAGCTTTCAGCCT TCTCTGTAGTTGCTACATTTTGAAATAGCTTTTTTCCCACATTTCTTTGTCAATTGTGTTTGTCGTAAATAATATACGCAGCCTTACCCATACAGTGGAG AGGCTGTTTCCCGGTTGCATTTATCTGGTTGTGTGTGTTTGACCGAAACTACGTAATTCAATATGCAGGATGCTTATACCAAATATGTCAAAGATTACTT CCTTGGAACCTTTGGAGTTAACATCCAAACTTATGACCAGAAGTATTTGAAAAACACTGCAATTAGCGACGACAGTTCTACTCGGTTATGGTGGTTTCAA GTTTGCACTGAAGTTGCGTACTTTCAGGTTGCTCCCTCAAATGATAGTATACGCTCCTCAAAAGTTGACACAAGATACCATCTGGACCTTTGCAAAAATG TCTTCGGAGACGGCATCTTTCCTGCTGTTGATGCTACTAATTTATACTATGGAGGCACAAAAATTGCTGGTTCAAAAATAATATTTACAAATGGCTCACA GGATCCATGGCGTCATGCATCGAAACAAAATTCATCCCCCGATATGCCTTCCTACCTCATCACATGTAATAATTGTGGCCATTGTTCCGATTTGCGAGGA TGTCCACAATCTCCTTTTATCATCGGAGGTGATGCTAAGAACTGCAGCTCTCCTGATGCAGTTCACAAAGTAAGGCAACAGATAGCAGATCATATGGATT TGTGGCTATCTGAGTGCCAGGATAATACAGGCAGGAGTTTTATATGAATGAGTATGTGTACATGTGATGCATGATGGTTATGGTTTTATGTGAATCATCT TTGTAAAATTTAACCAAAATGCAAAGCTAAACATTGCAATTTGCATGCATACATGGAATGCCATTACTTTATAGATTCATCTTCAGAGTTATGGCATGCC ATTTTCATAAGGCTTATTGTGTTTCTTTTATAAACATGAGCTCTTGTAATTTACTAGACTTGATTTTGGGGCATGTTGTGTTTCATGCTCCTTAACACTT TCTGTTGAGTGTGGCATGGCAACTTTGGTCATACTAATATGATGATACAAATTCAGAAAACTATTTGGGTTAATATATGTCTTGTAAGTGCTTTATTTCA CAAGTTAGAAAGTTATAATCCTACTTTTG
• Tissue: pods
• Gene name: LI_gene_166890;
• Additional information: details;

Expression of Ll_transcript_293283

FPKM

• PAB: 13.2
• PNAB: 7.5
• PS1: 9
• PS2: 10.7
• PS3: 12.4
• PW1: 13.1
• PW2: 12.6
• PW3: 10.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_293283

• Blastp: Probable serine protease EDA2 from Arabidopsis with 64% of identity
• Blastx: Probable serine protease EDA2 from Arabidopsis with 64% of identity
• Eggnog: protease, serine, 16 (thymus)(ENOG410XSGG)
• Kegg: Link to kegg annotations (AT2G18080)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019446871.1)
• Pfam: Serine carboxypeptidase S28 (PF05577.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;