Ll_transcript_290571

Id TrinityTRINITY_DN49163_c2_g3_i5
Name TranscriptLl_transcript_290571
SequenceAATCGGCTCAATTACAACAACGTTATCCATCGTTTCTATCTTCTTCGCTTTGTCGTTTTATTTCCGCCCAACCATGTCATCCACGTGGCGGTCAACAAAG AGCTTTAAATACTCGCTCTCAAAACACTGATAACGTGTTTTCTCCCTCCTTCTCTTTCTTCTTCTCACACCCTCATGGAAACTCGTCTTCTTTATTTCAT ATTTATATCCAATCTTTCATTTTTCAAATCAAACCCGTTTTATACAGATTAACCCAAAACCTTATATTTTCCCATCCATTTTCTTTATCCAAGAAAAAAT AATCCTTTTTAATTTTGTGGGTTTTCTCTCTCTCTGAAATTGTGTTTTATGGGCTTGTATAAGAATCTGGTTGGATTTTGAATTGTGAATGAAGTTTTGA TTTTTCTGCGGTTTTCGTTAAAGGGACAATAAGATCTCGATGTCTGCAGGGACATCTTCGTATTGGTGTCATAGGTGCAGCCGTTCAGTGAGGGTATTGA TGCCGGACATGGTTGTTTGTTCCGATTGCGGCGGCGGTTTTCTCGAGGAGATTCAGCATCCGGCGCGTGCTATTCACGCGGAAGAGGGCCTTCAGCGGTT CCCGGCAGCACCGATGAACATGGGTGGTCAGCGTCCAACTTTTGATCAGAATACTCGCCCCCGTTTTCGCCGAAGCCCCCGCATCAGTGGTGACCGGGCA CCGTTCAATCCGGTCATCATCCTGCGCGGCAGCCGTGGCGGTTCCACGGAGGGGGCTGCTGCTGTGGCTGCGGCGCAGGATGACCGGGATGGTCGTGGGT TTGAGCTTATGTATGATGATGGTGCAGGTTCTGGTCTTAGGACTTTGCCTCCTAGCATGTCTGAGTTTCTTCTTGGATCTGGATTTGATAGGATATTGGA ACAGCTTTCTCCAATTGAAATCAATGGTATTGGAAGGTATGAACACCCTCCTGCATCAAAATCTGCAATTGATTCATTACCAACAATTGAAATTTGTGAT GGTCATTTAGAATTGGAAACACATTGTGCTGTTTGTATGGAGCCTTTTGAATTTGGCACTTCAGTTAGGGAAATGCCTTGTAAGCATATATACCATGAAG AATGCATTCTTCCATGGCTCGCACTTCATAATTCGTGCCCCGTTTGTCGCCATGAATTGCCTGCTGATACTGTCCCAAATCAGAATACACCTTTAACACG GAATTCGCCGAACTCTCTTGCTTCGAACGAAATTGAAAATGATGGATTGACTATTTGGAGGTTTCCAGGGGGAGGGTTTGCTGTAGGGAGGTTTTCTGGT GGGAGAGGAGGTGCTGAGAGAGAGCTTCCAGTTGTTTATACCGAAATGGATGGTGGTTTTAACAATGGTGGTGAACCCCGGAGGATTTCCTGGTCATCTA GAGGGAATAGTGGAAGGAGAGAGAGTAGTGGTTTCAACAGGTTTTTCCAGAACTTGTTTGGTTGCTTTAGAGGTGGTGAAGTTGGTCCCCGGCAACCTAC TTCAAGTACAGCATCTCCATCCACCGGAAGGGCAAGTTCGCCACATTCCAATGTGGATCCCTCTCCACGTTCGCGCAGAACTTGGTCTATGGATGTGAAC AGTGGAATGAGTTCATGGTAAATGGTAGCTTAAACAAGCAGTGGAAGCTAAAAATATCAACTTTGTTTCGGTGTTCCCCAACTGAGACACGGAAAAAAGT TCTGTTTCAGGGTCATATTTGTCGGTTGGTCAATGTGCACTTAATGGGATGCACTTGAGCCTACAATGCACTGTAATCAACAGGATTTCACAATTCTCAC ATTTTCAGCTGCAAATGATGTATGGTACGAGAGATCAATGTTGTTGTTTTGGATAGGGAATTGTTACTGTAAAAGTCATCAGTCATTGTCTATATTAACA GTAGCCAATAGGGACAAGAAGCAGCAGCAATGGCATAAACCAACAGAGAAGAACCAAATAGGAAGAAAACCTGTGTGGTATTTATGTAACTTTTGGGCAG GGAACATTATGATCATTATCTTTATTCTAGTTTGTTAATGAACCGAAACGCCTTCATATTTTTTTTTATTTTATGTCTCTTCTTGTTCAACATTCGTAAA ATTAGTTAGCTTCAGTTTATGGTGATTTTCAAATTTATGACATCATTTGTCATTGTTTTTCTCAAAGAAACCCATAATGTTCATATGCATGATAAGCTTA TTGCCTCAAATTGTTTGTTAATGATGACTTATTTGCTGCTGGAGCTATAAGCTCACTTTTACCCCAACACCATTATATCTGTACAATTTTCTCTAAGAAA TCCAATGTGAATTGAATCCTTGGTACCTCTTTGTAGGCTGATATTGTGACTGTAATATTGTTCATCTTGTGTATTCTCTGGTTTAGTTTGTGTTATGATA CAATCAATAACTAACTACTTTGATTGGATCATAAAAAATAACAATATTACTTATAGGGGCATGGTTGACTGGTTGAGATCTAAAGACATGGTTTCGAGTC CCCGCTTGAATATTGTTAGTTTTATTTGGTTAGCTTCTCCATTAGAATTCTATCTGTTTAACATGTTCACGGCGATTGTAATAAGACAGCCCCTTGAGTT AGATGCAGGTCGCGAGATGGGAGTAAAGTACTAGTGAAGTTTCTTGGTGTTTGGTCCAACAAGATCAGTATTGTAGTGCTATTTTTGCTCTGGTGGTACA AGGACACTCACTGTTAATGGCATTTCTGGACTGAACAGAAGGATCTATGTCGAATATGCCTATTCATCGATGGTTCTATGGTAATTGGTGTGTGAAAGCT CAATTTTTCATCCTACTGAGATTCCATCTTTTGGGCAACCTAAAGGTTTCACATGTTTATTCATTCATGTTCCATTGTCTCTATCCTTGTTTACTAAAAC AAAACCATTTACATTGTGTTATTCTTTCATAAATAACAATATCCATCATTAAATATGTGAAGTATTTGTACAAATTCTAATGTTAATATTACATATTTGT ATCTTTTATTATCAAATTCCTACCAAATAATCCTTAAGAATCTGTAGTCAGTAACAATGATTAGTGGGTCTAATGCCCAA BLAST
Tissuepods
Gene nameLI_gene_167080; 
Additional informationdetails; 

Expression of Ll_transcript_290571

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_290571
BlastpProbable E3 ubiquitin-protein ligase RHC2A from Arabidopsis with 44.44% of identity
BlastxProbable E3 ubiquitin-protein ligase RHC2A from Arabidopsis with 46.01% of identity
Eggnogzinc ion binding(ENOG41121N2)
KeggLink to kegg annotations (AT2G39720)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019422227.1)
Pfamzinc-ribbon (PF14369.5)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;