Ll_transcript_290575

Id TrinityTRINITY_DN49163_c2_g3_i8
Name TranscriptLl_transcript_290575
SequenceAATCGGCTCAATTACAACAACGTTATCCATCGTTTCTATCTTCTTCGCTTTGTCGTTTTATTTCCGCCCAACCATGTCATCCACGTGGCGGTCAACAAAG AGCTTTAAATACTCGCTCTCAAAACACTGATAACGTGTTTTCTCCCTCCTTCTCTTTCTTCTTCTCACACCCTCATGGAAACTCGTCTTCTTTATTTCAT ATTTATATCCAATCTTTCATTTTTCAAATCAAACCCGTTTTATACAGATTAACCCAAAACCTTATATTTTCCCATCCATTTTCTTTATCCAAGAAAAAAT AATCCTTTTTAATTTTGTGGGTTTTCTCTCTCTCTGAAATTGTGTTTTATGGGCTTGTATAAGAATCTGGTTGGATTTTGAATTGTGAATGAAGTTTTGA TTTTTCTGCGGTTTTCGTTAAAGGGACAATAAGATCTCGATGTCTGCAGGGACATCTTCGTATTGGTGTCATAGGTGCAGCCGTTCAGTGAGGGTATTGA TGCCGGACATGGTTGTTTGTTCCGATTGCGGCGGCGGTTTTCTCGAGGAGATTCAGCATCCGGCGCGTGCTATTCACGCGGAAGAGGGCCTTCAGCGGTT CCCGGCAGCACCGATGAACATGGGTGGTCAGCGTCCAACTTTTGATCAGAATACTCGCCCCCGTTTTCGCCGAAGCCCCCGCATCAGTGGTGACCGGGCA CCGTTCAATCCGGTCATCATCCTGCGCGGCAGCCGTGGCGGTTCCACGGAGGGGGCTGCTGCTGTGGCTGCGGCGCAGGATGACCGGGATGGTCGTGGGT TTGAGCTTATGTATGATGATGGTGCAGGTTCTGGTCTTAGGACTTTGCCTCCTAGCATGTCTGAGTTTCTTCTTGGATCTGGATTTGATAGGATATTGGA ACAGCTTTCTCCAATTGAAATCAATGGTATTGGAAGGGTTGAACACCCTCCTGCTTCAAAAGCTGCAATTGATTCATTGTCAACAATTGAGATTAGTAAG AATCATTTAGAATTGGAATCACATTGTGCTGTTTGTATGGAACCTTTTGAATTATGTACTTCAGTTAGGGAAATGCCTTGTAAGCATATATACCATGAAG AATGCATTCTTCCATGGCTTGCACTTCATAATTCATGCCCTGTTTGTCGTAGCGAATTGCTTGCTGATACTATACCCTATCAGAGTACACCTTTAATGGG GAATTCGACGAATTCCGTTGCTATGAATGAGAATGAGAATGTAGGGTTGACTATTTGGAGGTTACCAGGTGGAGGGTTTGCTGTAGGGAGGTTATCTGGT GGGAGAAGAGGTACTGAGAGAGAGCTTCCGGTTGTTTATACGGAAATGGATGGTGGTTTTAACAATGGCGGCGAGCCTAGGAGGATTTCTTGGCCATCTA GAGGGAATAGAGGAGGAAGAGAGAGTGGTGGTTTGCGTAGATTTTTCCAGAACATGTTTGGTTGCTTAAGAGGTGGTGGAGTTGGAACTCGGCAACCTAT TTCGATTTCAACCTCTCCATCCATCACAAGGGCAAGTTCGTCGCATTCCAATGCGAATCCCTCCGTGCGTTCTCGCAGAACTTGGTCTATGGATGTGAAC AGTGGACTGAGGTCATGGTAAATGCAGCCAGCTTAAACAAGTGGGAAGGCTAAAAATATGAACTTTGTTTTGATTGTATTCCCCATCTGAGACAAGGGAA AGTTGTGTTTAAGGGTCATATGTATTGGTTGGTCAATGTGTACATAATGCATGGATTCGAGCCTATAAAATCAACCGGGTTTTGCGATTCACACATTTTC AGCTGCAGATGATGTATGGTATGAGAGTTAATGTTGTTCATTTTGGATGAGGAATTGTTAATGTTTAAAACTCATTACTCATAATCTGTATTAAAAATAG TGAATAGGGACAAGAAACAGCAATGATAACAGAAACCAATGGAGAAGAACCAAATAGGAGGAGAATCTGTGCTGTATATGTGTAACTTTTGAGCAGGGGA ACATTATATAACCACTATATTTATTCTAGTTTGATAATGAAATGAAACACCTTCATATTGTTTTATTTATGTTACTTCTTGTTTGTCAAGGGTACAATTT AGTTAGCTTCACTTTATGATGATCTTTCAAATTTATGACATATTTTGTCATTGTTTTTCTCAAGGAAATTCACAAGTTCAAATGCATGGTAAGCAAAGCA ATGCAATGAATCGATTATAATTGCGTTTATCTATTGTATTATCTACATCGTGTTTTATCGATCAATGTAGTGTTTTTTTGTGATGCAATCAATTGCC BLAST
Tissuepods
Gene nameLI_gene_167080; 
Additional informationdetails; 

Expression of Ll_transcript_290575

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_290575

BlastpProbable E3 ubiquitin-protein ligase RHC2A from Arabidopsis with 46.02% of identity
BlastxProbable E3 ubiquitin-protein ligase RHC2A from Arabidopsis with 45.72% of identity
Eggnogzinc ion binding(ENOG41121N2)
KeggLink to kegg annotations (AT2G39720)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019422227.1)
Pfamzinc-ribbon (PF14369.5)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;