Ll_transcript_467162

• Id Trinity: TRINITY_DN49204_c0_g1_i2
• Name Transcript: Ll_transcript_467162
• Sequence: CGTTGACACCCAAAGCAAAGTTGATTTCATTACAATATGATAGAAACTAACAAATGACTTAGAAACACACAACCACATCATCATCTTCAATTCTTCATCC TCAAAAAACAACACTTTTCAACTCATAATATTTTGTTCCTCTAATTATTCCTTCAATCATCACCGTTGATTTGCATACTTGTTTGACTCTCACACCCCAC ACAAACTCAAATACACTCTCTCTTTTCATTTTAACGCTTACCCTTCTTTCCTGTTTTCATAAAGTTTCACTCTTTCTCACCCTCTTGCTACAAAGATAGG TTTTTTTCTTCTTATGATCAGTTGAGTCAATGGAAGGTGATCAAAAAACTAGTTGTGTTGCATTTGGGACATCCTCAGGAGCAGTTTCTAAACCAATAAA CCGTTTCAATGCTCTCAATCAAATGGGTATTCCACCCTCTCACCCTAATACTAATATTTTGCCTTCGAGTTCAAACCCTTATTCCCAATTTATGGCCTCA CAACCCCAGAGATTGCGTTCTCCGAATCCGAGCCATGGGACTGGGTCATCATCTCATTCTAGGTCTTTGTCTCAACCCCCATTTTTCTCTTTGGATTCCT TGCCCCCTTTGAGTCCTTTGCCTTATCAAACATCGGGTGCTGGCAGTACATTTGTTGAATCGCTTGCAGCAAGCGTGCCTATGGAGGAAAGCTTGGTTAA TGTGCCTTCTGCGTCTTTTAACCGCGGTGTTCCTGTTCAACTTGGTCATAGTCTTCCTCCTCGTAAGGGACATAGGCGTTCGAGCAGTGATTCTCCTTTA GGAATCTCTGATTATATTCAGTCCATTCCTCAGTTTGTTTCATCTGGTGCTTGGAATGATGATGACAATTCGGTTTCAAGAGTCGAAAGCTTGGGTCTTG AGAAGGAGAAGAAACCGGTTCAATTAGTCTTAAAGGTGCCGAATAAGGATATGGACCGTGTTGATGGCTTTAGTGGAGAAATAGGGAATGTGAGGAAAGA GGATCCGCTGGATGATTTATTTAGTGCATACATGAATTTGGACAACTTTAATAATATGGGGTTTTCAATGGAAGATAAGGATATGGATAGCAAAACAAGT GGTTCCAAGACAGTTGAAAGCAGTGACAATGAAGTTGAGAGTCGTGCAAAGGGGAAAACCACTGGTGCTTGGGGGGCCAGTTCAAGCTGTTCTGAAGAAC GAAAGGAAGGAGTGAAGAGGAATTTGAATGGAGAAATCGCACCTGGTGCCCGGCACCGGAGAAGTTTTTCATTGGATAGTTCCATTGGAAATTTCCATAT TGAAGATGGATCACTTAAGCTTCCGCCTTTGCAAAATCAAGTTGGTCAACATTCGCCTAGCAATTCAATAGACGGTAAAACATCTGAAACCAGCATGGAG TTTGGAAACAGCGAGTTCAGCTCCGAGGAGCTAAAGAAAATAATGGAAAATGACAAGCTTGCTGAAATTGCCATGTCTGATCCCAAGCGTGCAAAAAGGA TTTTGGCTAATCGTCTATCAGCTGCACGTTCAAAAGAGCGGAAGACGCGATACATTTCTGAATTGGAGCACAAGGTGCAAACTCTTCAGGCAGAGACAAC CACATTGTCTACCGAGTTTACCAAATTACAGATGGATTCTGCCGAGCTTAAAAGTCAGAATAACGAGTACAAATTGAGGCTTCATGCCTTGGAACAACAG TCTCAACTGAAAGATGCTCTGAATGAGACTTTGGATGCTGAAGTTCGCCGTTTAAGGCGCACTGTCGCAGACCTTGGTGGGGAGTCCCTCCTCTCAAGTC GCATGGCTCAACAGCTTGCTATTAACCAACAAATGTTCCAGTTACAACAGCAACAGCAGGCCAGTCAGGTTAGACAATTCCAACAGCAGAACAACCATCC TCAGCAAGAGACACAATCTCAGTCGCAGCAACAGCAAATTCAGCGCAACACAGAATTGCAATCCCAGAGACAGAATGGCAAAGCTACCGCTTACTGATAC CGGGAAATCAGGGTAGTAATAGAATTGGCTGCTGCTTCTGAAACAAACTTCGATGATATATATTTTGAAATGGAGGCGTTGGCGTATAAGTTATAATCCA TCATATATAATAAGCACTTAACTAAATTATTTTGCCTATACAGAGGTTGGTTCATTATCGCTATTTAGATTTTTATCTTAAATGTTTCACCCATATAAAC TTGGGATATTACTTATTACATTTTTTTGTATTAGTGGACCTTGGGGTCATATCATCATTACAATCCCCTTGCCCTATTGAATGGGCTATCTTCCGGTATA AAATTCTTAAGACGGTTATTTATCTCACATGGTTCTTTTGGCAGTGGCAATACAATCACTAGTTTTTTTTAAAGGGAGAACAATTCCTGGAATTTTTTTT CAGGAATTCAAGGTTATGTATTTCATTTTGCTTGTTTCATCGCAGATCTGGTAAGTTATTTGGCGCAGAAGGGGCTATCTTCTTTGTGCTCTTTGCCAAG TACAGGGTTTTGGTATGCGAGTCATTTCGATATGTGGTATGACATCGGGACATAGAGGTAATGAGAAAATTCGGTAATTATGCCCGAGCTGCTCCAAAAA GCTAAACGAAGCTTTGCGACTGAGTGGTTTAAATACGACCTTGTTTAAGCTGTCGGGCTGGTTCTGTAGTTGTTAAATGTCAATCTGTTTAAATCATCAT ATTTTTAGCTAGGCTTATTTAACGTGCCTTAGATGAAGGTATAGATTACTTAGTTGTGATATATTTCAATTTCAAAATTAGTTCTATTTGATTGTGTGAT GAAAAATTTGCTTGATCTATTTTAGTCGGTTCACTTGGTTGTTTGGAAGCCTTTAATTGTTCAGTTGAAGCGTAAACAAGTCACTGGTTTGAATGAAAAA AA
• Tissue: pods
• Gene name: LI_gene_167378;
• Additional information: details;

Expression of Ll_transcript_467162

FPKM

• PAB: 0.8
• PNAB: 1.3
• PS1: 5.4
• PS2: 2.4
• PS3: 2.7
• PW1: 2.5
• PW2: 2.8
• PW3: 1.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_467162

• Blastp: Transcription factor VIP1 from Arabidopsis with 45.71% of identity
• Blastx: Transcription factor VIP1 from Arabidopsis with 47.34% of identity
• Eggnog: Transcription factor(ENOG410YA2S)
• Kegg: Link to kegg annotations (AT1G43700)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019458592.1)
• Pfam: Basic region leucine zipper (PF07716.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;