Id Trinity | TRINITY_DN49204_c0_g1_i3 |
---|---|
Name Transcript | Ll_transcript_467163 |
Sequence | ATCAGGTAAAAAGATACCCTCTTCAGTTTTTATTATTATTTTATTTTAGTGGAAGCTTTTATATTTTTCATTTTTTTTTGCAATTATATTAAACTATACC AACTGAGTTTCTGGGATTTAGGTTTTTTCTTCTTGTTCACGTTAATGTTTTCATTATTTTGATTTACCAATGTTTTGTGTTTATGATTAATTGGTTAATA GTTCTGAGCATTGTAGTTGAGTCAATGGAAGGTGATCAAAAAACTAGTTGTGTTGCATTTGGGACATCCTCAGGAGCAGTTTCTAAACCAATAAACCGTT TCAATGCTCTCAATCAAATGGGTATTCCACCCTCTCACCCTAATACTAATATTTTGCCTTCGAGTTCAAACCCTTATTCCCAATTTATGGCCTCACAACC CCAGAGATTGCGTTCTCCGAATCCGAGCCATGGGACTGGGTCATCATCTCATTCTAGGTCTTTGTCTCAACCCCCATTTTTCTCTTTGGATTCCTTGCCC CCTTTGAGTCCTTTGCCTTATCAAACATCGGGTGCTGGCAGTACATTTGTTGAATCGCTTGCAGCAAGCGTGCCTATGGAGGAAAGCTTGGTTAATGTGC CTTCTGCGTCTTTTAACCGCGGTGTTCCTGTTCAACTTGGTCATAGTCTTCCTCCTCGTAAGGGACATAGGCGTTCGAGCAGTGATTCTCCTTTAGGAAT CTCTGATTATATTCAGTCCATTCCTCAGTTTGTTTCATCTGGTGCTTGGAATGATGATGACAATTCGGTTTCAAGAGTCGAAAGCTTGGGTCTTGAGAAG GAGAAGAAACCGGTTCAATTAGTCTTAAAGGTGCCGAATAAGGATATGGACCGTGTTGATGGCTTTAGTGGAGAAATAGGGAATGTGAGGAAAGAGGATC CGCTGGATGATTTATTTAGTGCATACATGAATTTGGACAACTTTAATAATATGGGGTTTTCAATGGAAGATAAGGATATGGATAGCAAAACAAGTGGTTC CAAGACAGTTGAAAGCAGTGACAATGAAGTTGAGAGTCGTGCAAAGGGGAAAACCACTGGTGCTTGGGGGGCCAGTTCAAGCTGTTCTGAAGAACGAAAG GAAGGAGTGAAGAGGAATTTGAATGGAGAAATCGCACCTGGTGCCCGGCACCGGAGAAGTTTTTCATTGGATAGTTCCATTGGAAATTTCCATATTGAAG ATGGATCACTTAAGCTTCCGCCTTTGCAAAATCAAGTTGGTCAACATTCGCCTAGCAATTCAATAGACGGTAAAACATCTGAAACCAGCATGGAGTTTGG AAACAGCGAGTTCAGCTCCGAGGAGCTAAAGAAAATAATGGAAAATGACAAGCTTGCTGAAATTGCCATGTCTGATCCCAAGCGTGCAAAAAGGATTTTG GCTAATCGTCTATCAGCTGCACGTTCAAAAGAGCGGAAGACGCGATACATTTCTGAATTGGAGCACAAGGTGCAAACTCTTCAGGCAGAGACAACCACAT TGTCTACCGAGTTTACCAAATTACAGATGGATTCTGCCGAGCTTAAAAGTCAGAATAACGAGTACAAATTGAGGCTTCATGCCTTGGAACAACAGTCTCA ACTGAAAGATGGTATGCATAAATACTATAACTTCAATATATTTGATGTTTAGATATTTAATGAAAAATGGTAATAACTGAAGATGGTCATCATCATTACC ACCCAAATTATAATGCCTCCAAGCTTTCACTGCTGATCCCCCTCCATGTCATTCTCAGCTGTTGCTTCATTACCACTTACTAGTTGTCACTATTCTCCCT TGTTTGAATTTGTTTATGGAAAAAAATTCTGGAAGTTCTAATTGTTATCGATTAATGACCAATTTCTGAATTTCTCTTATTTTTTCTTTATTCGTGGCTA CTTTTGACACAACTTTAATCAAATATATCTAGGGAATGCAAGTGGGATACCCACTACTTCAGTTGATGTTTTTATTTTTTATGTTTCTGTGATTACAATC ATGATCAAGAAAATTATTGTTGTATAATCATACATTGAAAACTCGTATGCGATTAAACAGCTTGAACTTGTAAGCGGATATTTCTATCCCCCTCTTCCTT CTTCAAAAAGTGCTACGCTCCCTTGTTTTTTGGGCTGGATATGAATATTTAGCTGCACGCCTGTGGAACTCTAAGAACAGGAGTTTTAACTGTTCCATTT ACAGTATTGATTTTTGTTTTTAGGCTAACACTCAATGGTGAAAGTAATACACTCAATAGTGCATTTTGCTAGTATTTCTGCACTTTCTATATCTTCCAAG TGCAGGTTCCTCTCCTTTTATACACGATTTTTAGTATCTAATGCAGCATGCCAGCTTTTCATTTCAACAGCCGTGTAAATAGCTTGATTCTTATTTTGGC AGCTCTGAATGAGACTTTGGATGCTGAAGTTCGCCGTTTAAGGCGCACTGTCGCAGACCTTGGTGGGGAGTCCCTCCTCTCAAGTCGCATGGCTCAACAG CTTGCTATTAACCAACAAATGTTCCAGTTACAACAGCAACAGCAGGCCAGTCAGGTTAGACAATTCCAACAGCAGAACAACCATCCTCAGCAAGAGACAC AATCTCAGTCGCAGCAACAGCAAATTCAGCGCAACACAGAATTGCAATCCCAGAGACAGAATGGCAAAGCTACCGCTTACTGATACCGGGAAATCAGGGT AGTAATAGAATTGGCTGCTGCTTCTGAAACAAACTTCGATGATATATATTTTGAAATGGAGGCGTTGGCGTATAAGTTATAATCCATCATATATAATAAG CACTTAACTAAATTATTTTGCCTATACAGAGGTTGGTTCATTATCGCTATTTAGATTTTTATCTTAAATGTTTCACCCATATAAACTTGGGATATTACTT ATTACATTTTTTTGTATTAGTGGACCTTGGGGTCATATCATCATTACAATCCCCTTGCCCTATTGAATGGGCTATCTTCCGGTATAAAATTCTTAAGACG GTTATTTATCTCACATGGTTCTTTTGGCAGTGGCAATACAATCACTAGTTTTTTTTAAAGGGAGAACAATTCCTGGAATTTTTTTTCAGGAATTCAAGGT TATGTATTTCATTTTGCTTGTTTCATCGCAGATCTGGTAAGTTATTTGGCGCAGAAGGGGCTATCTTCTTTGTGCTCTTTGCCAAGTACAGGGTTTTGGT ATGCGAGTCATTTCGATATGTGGTATGACATCGGGACATAGAGGTAATGAGAAAATTCGGTAATTATGCCCGAGGGGATGGGAGTGGTTTATATACAACC CAGTTTAAGTCTGCTGGGTTGCTGCCGGGATTGTAAAATGCCAGCCTGTTCAAATCATCATATTTTTGCTAGGCTTATTTAATTTGCCTTAGTTGAAGGT AGATTACTTAGTCATGATTATTCGATTCAAGATTAGTTCTAGCTGCTTGATCACGTGAAGAAATTTTCTCTATCAAATTTATTTGGTTCACTTGATTGTT TGGAAGCATTTGAGGGTGTGTTTGATGAATTAGATGTGATATGGAGTATGATAGAACATGAACAATGTGAATTCTTATGTTGCCCAATGTTCTTTAATCA AGTTTTCACATGACCCAGAGTGATCATTCATCATGTAATATTACTCTCACTCTTTCAACCCACCCCAGGAAGGGAAAATGGTCTGAGAAGTAATGCTCAC TCAACAAAGCTTGAGCCTATTTAAGCAACACATGCAATCTACTCCTCCTATGGCCATCCACTCCCTAACTCATCATCATCATAAGCATACATTTTCCC BLAST |
Tissue | pods |
Gene name | LI_gene_167378; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_467163
Blastp | Transcription factor VIP1 from Arabidopsis with 47.09% of identity |
---|---|
Blastx | Transcription factor VIP1 from Arabidopsis with 47.09% of identity |
Eggnog | Transcription factor(ENOG410YA2S) |
Kegg | Link to kegg annotations (AT1G43700) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019458592.1) |
Pfam | Basic region leucine zipper (PF07716.14) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |