| Id Trinity | TRINITY_DN49204_c0_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_467164 |
| Sequence | CGTTGACACCCAAAGCAAAGTTGATTTCATTACAATATGATAGAAACTAACAAATGACTTAGAAACACACAACCACATCATCATCTTCAATTCTTCATCC TCAAAAAACAACACTTTTCAACTCATAATATTTTGTTCCTCTAATTATTCCTTCAATCATCACCGTTGATTTGCATACTTGTTTGACTCTCACACCCCAC ACAAACTCAAATACACTCTCTCTTTTCATTTTAACGCTTACCCTTCTTTCCTGTTTTCATAAAGTTTCACTCTTTCTCACCCTCTTGCTACAAAGATAGG TTTTTTTCTTCTTATGATCAGTTGAGTCAATGGAAGGTGATCAAAAAACTAGTTGTGTTGCATTTGGGACATCCTCAGGAGCAGTTTCTAAACCAATAAA CCGTTTCAATGCTCTCAATCAAATGGGTATTCCACCCTCTCACCCTAATACTAATATTTTGCCTTCGAGTTCAAACCCTTATTCCCAATTTATGGCCTCA CAACCCCAGAGATTGCGTTCTCCGAATCCGAGCCATGGGACTGGGTCATCATCTCATTCTAGGTCTTTGTCTCAACCCCCATTTTTCTCTTTGGATTCCT TGCCCCCTTTGAGTCCTTTGCCTTATCAAACATCGGGTGCTGGCAGTACATTTGTTGAATCGCTTGCAGCAAGCGTGCCTATGGAGGAAAGCTTGGTTAA TGTGCCTTCTGCGTCTTTTAACCGCGGTGTTCCTGTTCAACTTGGTCATAGTCTTCCTCCTCGTAAGGGACATAGGCGTTCGAGCAGTGATTCTCCTTTA GGAATCTCTGATTATATTCAGTCCATTCCTCAGTTTGTTTCATCTGGTGCTTGGAATGATGATGACAATTCGGTTTCAAGAGTCGAAAGCTTGGGTCTTG AGAAGGAGAAGAAACCGGTTCAATTAGTCTTAAAGGTGCCGAATAAGGATATGGACCGTGTTGATGGCTTTAGTGGAGAAATAGGGAATGTGAGGAAAGA GGATCCGCTGGATGATTTATTTAGTGCATACATGAATTTGGACAACTTTAATAATATGGGGTTTTCAATGGAAGATAAGGATATGGATAGCAAAACAAGT GGTTCCAAGACAGTTGAAAGCAGTGACAATGAAGTTGAGAGTCGTGCAAAGGGGAAAACCACTGGTGCTTGGGGGGCCAGTTCAAGCTGTTCTGAAGAAC GAAAGGAAGGAGTGAAGAGGAATTTGAATGGAGAAATCGCACCTGGTGCCCGGCACCGGAGAAGTTTTTCATTGGATAGTTCCATTGGAAATTTCCATAT TGAAGATGGATCACTTAAGCTTCCGCCTTTGCAAAATCAAGTTGGTCAACATTCGCCTAGCAATTCAATAGACGGTAAAACATCTGAAACCAGCATGGAG TTTGGAAACAGCGAGTTCAGCTCCGAGGAGCTAAAGAAAATAATGGAAAATGACAAGCTTGCTGAAATTGCCATGTCTGATCCCAAGCGTGCAAAAAGGA TTTTGGCTAATCGTCTATCAGCTGCACGTTCAAAAGAGCGGAAGACGCGATACATTTCTGAATTGGAGCACAAGGTGCAAACTCTTCAGGCAGAGACAAC CACATTGTCTACCGAGTTTACCAAATTACAGATGGATTCTGCCGAGCTTAAAAGTCAGAATAACGAGTACAAATTGAGGCTTCATGCCTTGGAACAACAG TCTCAACTGAAAGATGGTATGCATAAATACTATAACTTCAATATATTTGATGTTTAGATATTTAATGAAAAATGGTAATAACTGAAGATGGTCATCATCA TTACCACCCAAATTATAATGCCTCCAAGCTTTCACTGCTGATCCCCCTCCATGTCATTCTCAGCTGTTGCTTCATTACCACTTACTAGTTGTCACTATTC TCCCTTGTTTGAATTTGTTTATGGAAAAAAATTCTGGAAGTTCTAATTGTTATCGATTAATGACCAATTTCTGAATTTCTCTTATTTTTTCTTTATTCGT GGCTACTTTTGACACAACTTTAATCAAATATATCTAGGGAATGCAAGTGGGATACCCACTACTTCAGTTGATGTTTTTATTTTTTATGTTTCTGTGATTA CAATCATGATCAAGAAAATTATTGTTGTATAATCATACATTGAAAACTCGTATGCGATTAAACAGCTTGAACTTGTAAGCGGATATTTCTATCCCCCTCT TCCTTCTTCAAAAAGTGCTACGCTCCCTTGTTTTTTGGGCTGGATATGAATATTTAGCTGCACGCCTGTGGAACTCTAAGAACAGGAGTTTTAACTGTTC CATTTACAGTATTGATTTTTGTTTTTAGGCTAACACTCAATGGTGAAAGTAATACACTCAATAGTGCATTTTGCTAGTATTTCTGCACTTTCTATATCTT CCAAGTGCAGGTTCCTCTCCTTTTATACACGATTTTTAGTATCTAATGCAGCATGCCAGCTTTTCATTTCAACAGCCGTGTAAATAGCTTGATTCTTATT TTGGCAGCTCTGAATGAGACTTTGGATGCTGAAGTTCGCCGTTTAAGGCGCACTGTCGCAGACCTTGGTGGGGAGTCCCTCCTCTCAAGTCGCATGGCTC AACAGCTTGCTATTAACCAACAAATGTTCCAGTTACAACAGCAACAGCAGGCCAGTCAGGTTAGACAATTCCAACAGCAGAACAACCATCCTCAGCAAGA GACACAATCTCAGTCGCAGCAACAGCAAATTCAGCGCAACACAGAATTGCAATCCCAGAGACAGAATGGCAAAGCTACCGCTTACTGATACCGGGAAATC AGGGTAGTAATAGAATTGGCTGCTGCTTCTGAAACAAACTTCGATGATATATATTTTGAAATGGAGGCGTTGGCGTATAAGTTATAATCCATCATATATA ATAAGCACTTAACTAAATTATTTTGCCTATACAGAGGTTGGTTCATTATCGCTATTTAGATTTTTATCTTAAATGTTTCACCCATATAAACTTGGGATAT TACTTATTACATTTTTTTGTATTAGTGGACCTTGGGGTCATATCATCATTACAATCCCCTTGCCCTATTGAATGGGCTATCTTCCGGTATAAAATTCTTA AGACGGTTATTTATCTCACATGGTTCTTTTGGCAGTGGCAATACAATCACTAGTTTTTTTTAAAGGGAGAACAATTCCTGGAATTTTTTTTCAGGAATTC AAGGTTATGTATTTCATTTTGCTTGTTTCATCGCAGATCTGGTAAGTTATTTGGCGCAGAAGGGGCTATCTTCTTTGTGCTCTTTGCCAAGTACAGGGTT TTGGTATGCGAGTCATTTCGATATGTGGTATGACATCGGGACATAGAGGTAATGAGAAAATTCGGTAATTATGCCCGAGGGGATGGGAGTGGTTTATATA CAACCCAGTTTAAGTCTGCTGGGTTGCTGCCGGGATTGTAAAATGCCAGCCTGTTCAAATCATCATATTTTTGCTAGGCTTATTTAATTTGCCTTAGTTG AAGGTAGATTACTTAGTCATGATTATTCGATTCAAGATTAGTTCTAGCTGCTTGATCACGTGAAGAAATTTTCTCTATCAAATTTATTTGGTTCACTTGA TTGTTTGGAAGCATTTGAGGGTGTGTTTGATGAATTAGATGTGATATGGAGTATGATAGAACATGAACAATGTGAATTCTTATGTTGCCCAATGTTCTTT AATCAAGTTTTCACATGACCCAGAGTGATCATTCATCATGTAATATTACTCTCACTCTTTCAACCCACCCCAGGAAGGGAAAATGGTCTGAGAAGTAATG CTCACTCAACAAAGCTTGAGCCTATTTAAGCAACACATGCAATCTACTCCTCCTATGGCCATCCACTCCCTAACTCATCATCATCATAAGCATACATTTT CCC BLAST |
| Tissue | pods |
| Gene name | LI_gene_167378; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_467164
| Blastp | Transcription factor VIP1 from Arabidopsis with 47.09% of identity |
|---|---|
| Blastx | Transcription factor VIP1 from Arabidopsis with 47.09% of identity |
| Eggnog | Transcription factor(ENOG410YA2S) |
| Kegg | Link to kegg annotations (AT1G43700) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019458592.1) |
| Pfam | Basic region leucine zipper (PF07716.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |