Ll_transcript_467087

• Id Trinity: TRINITY_DN49216_c1_g3_i10
• Name Transcript: Ll_transcript_467087
• Sequence: AGAATGATATTTATTGGGAGGTACAACAAGCACCGTCAAAATCGATTAATTACTTACAAACAAAAAAAGCAAAAAGTTAGTAGATACTCTTGTTAAAGGA AAATCTTACTATTTCTTTCAACTTTTACAGATAAATAGTACAATTTTCTGGGACTGTCATAATAAGTTACACACCAAAACAAAGAGAGAGAGAGAGAGTT AATAAGGAAGAGTTTCCATAATGGTGATGCTTTGAGAACAACCACACCACCATCTCCGGTAACTGCCCTATTCAACATTGGAATTATCACACCCCTTTTT CCTTTTTCCTTTTTCATTCCAATCATTCTTTCACAATTCTAAACACTCACTTTTATATTCAACAATCTTCATTCTTTCACTGTCACATAATTGCTTCATA CTTCACACTCATACAAAAAATTTCAGATCTTTCACCATATTTTCTCTACCATTATAGCTTTTTTCTCTTATTAGGCCTTAAATTCATGTGGGTTTCTCTT CTTTATGCTTGCAACTTAGTGTGGCTTAATAAAGTCAAGGTCTTTGGTATCTTGGTATTAATAACCACTTGGGGTATTTGAAATTTGTTATGTTGTTTCT GTGATTGAATTATGTTTCTGAAAAGGATTAGTGAAATTGATGATTGCATATTATGTGGTTCTCTATTTAGTCTTTGAACTGATCATGGTATTATTGGACA TCATCATGCCTATGATTTTTTCTTCTTCACTGAATTAGTAAAGTGATTATTGATTCAATGTTCTTCATGGTCTTTCTTTGAGTGTTGACTATGTAATTGT TAATTTGGTTGCTAATTCATTTTTCGCTGCGAGTTTTGGTGAACTGTTGTGTATGGATTGTTATGCTTTGATTTCGGGTAGTTTAAATTCTCGATTTTTA TTCAATTGGTGACCTTTTCTTGATTTCCTGGGTAACGAGTCGTCGGCGATCACTGCCCTTGGGCTAAGTTATGTATGATTATAAGTCTAAATTGATCCAT TCACTAGTGAATCCTACATCATGCAGTTTTGTCATTCTTGAATAGATTTTTTTCGTTCTGTCCTTTTATTTTGTTGGAAGAGCATTAGTGGAATATATGT AAACTCGGAGAGTTAACATAAGAAAAGCAGTTGTGGAGTCTTGATATTTCTTTCCAAATATGTTTAATGCACTCCGAGCACATATGATGATATCATCGGT TGCAAATTCTTCCATTTCTGTCTTCATACAAAATATCTGTGTTTGTGCAGGAAGTTTTTAGTTAGATTAGCATGCTAATAGTACTTTTTGTTTCACTATT TATCCACTTTATGCATGAACTTTTCAAAGATACCGAGAAGAAGTTAAATATGAGAGGACCTAAGAAATGCAGTCATTCAAAGGAAAAGACTGAGTCAAAG TTAGACTCATTGTCGAGATTTGATCCAAGTAACACAAAAGGCCGAGTGAAGAAGAATAGGTTGAAATCAGAATCGTATAAACACAGAGTCGGCACAAACA CATCAAGAATGAGAGTTAATTATTCTTCCTTAGAGGGGCCAATCAAGGACTATTCAAATAAAAAATTGATTATTCGACAAAATCCGTGTAAAACTGATGG AAAATCTTCACAGATGCAGTCTTCAACTATGCTACATGGCAAAAAGATTCCTCTTTGTTCAGGAAACGAGGGAGAAGATATTGACCGGGAGGCAAAGATC CATAAAATGAAGAGAAGGAGAAAGAAGAAAAGGCAAAGGGATAATGTGGATCTTGATGATGCTTCACGCCTGCAGAGGAGAACAAGGAACCTCTTAATCA GAATGAAACAAGAGCAGAACCTAATTGATGCTTACTCTGGAGAAGGTTGGAAAGGCCAGAGGTATAGGATTTCTTCTTCTTTAGCTTATCCGTATATTCA ATTATTCAAATGTTCAGTAAATATGGAAAAAAGCTTGCAGCAATGCAGTGTGATCTTATTGGAATCCTTTTATTTATCTTTTTAAGCCGAAAAATGATCC CTTGATAATTAGCTTTGTAGCTGATCGTTCTTCTTTGTTTTTACGAAAACGTCCGCACAGTCGAGAAAAGATTAGGCCAGAAAAGGAGTTACAAAGAGCA AAGAAGCAGATTTTAAAATGTAAACTTAGTATTCGTGATGCAATTCGTCAGCTGGACTCTCTTAGTTCAGTGGGTAGCATTGAAGGTTCCGTCATTGCTC CAGATGGATCAGTTTATCATGAACATATATTCTGTGCAAATTGCAAGCTGCGTGAAGCATTCCCAGATAATGATATCATACTCTGTGATGGCTCATGCAA TCGTGCTTTTCATCAAAGATGCCTTGATCCTCCTTTGGACACTGAAAATATTCCCCCGGAAGACCAGGGCTGGTTTTGCAAGTTTTGTGAATGTAAAATA GAAATAATCGAAGCAACGAATGCCCATCTGGGCACTCAATTCTCCTTGGACAGTACTTGGCAGGATGTATTCAAGGAAGAGGCTACTTTACCGGATGGTG ATAATGCATTACTAAATCAAGAAGAAGAATTGCCGTCAGATGATCCTGATGACGATGATTATAATCCAGAGAGGAGGGAAGACAGCCTCAGCACCAACGT AAAAGGAACTGATGATAATGCATCTTTTGATTCAAGCAGTTCCACCAGTGTGTCGTCTTTGAGTAGTGAATGTTCTCTAGTAGATGAAGACATTTGCCGT GAATACTGTTCTGTGAATAGCTGCATAGATTCTGACGATTCCGGGCAAATAGCATGTGGCCATAGGCAGCGTAAAGCAGTTGACTACAAGAAGCTTCATG ATGAAATGTTTGGGAAGGATGCTCCTGCATGTGAGCAAGTTAGCGAAGATGAAGATTGGGGTCCTGGCAAGAGAAAGCGAAGAGAAAAGGAGTCCGATGC TGCTAATACTCTTATGACACTACATGAAATCGAAAATAAAAATTGTAATAATGATTCAATAAGAGAGGGCTCTTCTTATCTACACAAAAAAAGACCTTGT TTCAGGATTCCACATGATGCAGTTGAGAAGCTTCGTCAAGTCTTTGCACAGAATGAACTTCCTTCAAGATCCATGAGGGAAGCTCTTTCGAAAGAGTTGG GACTTGACTTTGCGAAGGTTAACAAATGGTTCAAAAATGCACGTTATGCAGCACTTAAAACCAGAAAGTGTCAATCTGAAGGAGAACAACTTAAGAGTTT CACTTCCAAGACCTCAAAGGATTCTAAATCACAAAATATAGAGAAAGATGAGCTTCTGAGACCGAGGGCCTCCAAAATATCCGCAGTCCATTGCCAGAAG AACGGTAAAAATGTCACAGGCAGGGTGAAAACAAACTCATGCCGCATTCCTTTACAGGAAAGGCGACAAGAAAACAGCAACAAGATATTGTCGAAAAACG AAAATGGCAACAAGGACAAGGAGGTAAGTGATGATGTTTGCTTGAAGAAATTGTTGAAAGAAAGGAAAAGGAAGGTAAATTCTATATTTGAAGGAGACTT TCATGCAGCAGAGTTGGAATTTGAAAGACTTAGCAAAGTGAAGAATAAAGTAGATAGTATAAAACAAAGACTAATTGAAGTTCAAAATTGCAGAGCAAAG GGTTCAGATGAATCATGTTCTATTGAATCTTCTGTCACATATGTACCTATAGCTGAGTTAAGGGAAAAGGTTTAATAGTAAATATATGTTTTAACATTTA TTTTTATCTGTAGTGACCTTACATTGCACAATGAAAT
• Tissue: pods
• Gene name: LI_gene_167447;
• Additional information: details;

Expression of Ll_transcript_467087

FPKM

• PAB: 0
• PNAB: 0.1
• PS1: 0
• PS2: 0
• PS3: 0.2
• PW1: 0.2
• PW2: 0.1
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_467087

• Blastp: Pathogenesis-related homeodomain protein from Arabidopsis with 54.2% of identity
• Blastx: Pathogenesis-related homeodomain protein from Arabidopsis with 57.66% of identity
• Eggnog: PHD finger protein(ENOG410XQQA)
• Kegg: Link to kegg annotations (AT4G29940)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019415771.1)
• Pfam: Homeobox domain (PF00046.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;