| Id Trinity | TRINITY_DN49328_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_484766 |
| Sequence | GATAAAGGTGACATTGGCAGAGATAAAGGTGACATTGGCAGAGATAAAAGTGACATTGGCAGAGATAAAGGTGACATTGGCAGAGATAAAGGTGACATTA GCAGAGATAAAGGTGTTTATGTTGGTGTTGAGGAGGAAGAAGATGACCAGGTTGATATAAAAGATGAAGAACTAGATGATATATGGAGGGAAATGTCAAT GGCAATAGAATGCTCCAAAGATGTTTCTGTGAACCCTCAGCCTGATGAAGAACCCGAAATTGATGAGGACTGTGATCATTCTTTTGTTTTAAAAGACGAC CTTGGTTACGTTTGTCGTGTTTGTGGGGTTATCGACAGAGGAATTGAAACCATATTTGAGTTCCAGTACAAGGTTAAAAGGAGTACTAGAACTTATGTGT CTGATTCATGGAATGCCAAAGAAAAAGATGCATTTGGAATCAAGATTGCTGAGGATGATCTCTTGGTAACTGACATCTCTGCACACCCTAGGCATATGAA ACAAATGAAGTCTCATCAAGTCGAAGGATTCAATTTTCTTGTTAGAAACCTTGCAGGTGATCATCCTGGGGGTTGTATCTTGGCACATGCTCCAGGATCT GGGAAGACATTCATGATAATCAGTTTCATGCAGAGTTTTCTTGGCAAGTATCCTAATGCTAGACCTCTAGTGGTGCTTCCTAAGGGGATACTATCAACTT GGAAGAAGGAGTTCCAGACATGGCAAGTGGAGGACATACCGCTCTATGACTTTTACACTGTGAAGGCAGACAGTAGATCTCAGCAACTTGAAGTGTTGAA ACAGTGGGTGGAACATAAGAGCATCCTTTTCTTAGGATATAAACAGTTCTCTTCAATCATATGTGAGAATGGAACTAGCAGCTCATCAACAGCTTGCCAA GAGATATTGCTTAAGGTTCCTTCAATTCTCATTTTAGATGAGGGACACAATCCAAGGAATGATAATACTGATATGGTACATTCCCTTGCCAAAGTACAAA CCCCTAGAAAAGTTGTACTGTCAGGAACCCTATATCAGAATCATGTGAAGGAGGTTTTTAACATCTTAAATCTTGTGAGGCCGAAGTTTATGAAGATGGA AACATCTAGGCTTATTGTCAAACGCATTTTCAGTAGAGTACATATACCTTCTGGTAAAAGAGGTTTCTTTGATTTGGTAGAAGACACATTGCAAAAGGAC CCAGATTTCAGAAGGAAAGTGGCTGTTATACAAGATTTGCGTGAGATGACTAGCCAGGTACTTCACTATTATAAAGGAGATTTTCTTGATGAGCTTCCCG GTCTTGTTGAATTTACTGTCGTCCTCAATCTTACCCCTAGACAGAAGCTTGAAGCTGAAAAATTAAAGAAGTTATCCAGGAAGTTTAAGATTAGTTCTGT GGGTAGTGCTGTCTATCTTCATCCTAAATTGAAGCCCCTAGCTGAAAAATGTAGTGAAAATAGCAAAATTGATAATACAAAGGAACTGGATGATGTGCTA GAGAAACTGGACGTGAAAGATGGTGTGAAATCAAAATTCTTTCGCAATATGTTGAACCTATGTGAATCGGCTGGGGAGAGGCTGCTGGTTTTTAGCCAAT ATCTCTTACCTTTGAAATATTTAGAAAGGTTAACTATGAAATGGAAGGGTTGGAGTGTCGGGAAAGAAATCTTTGTCATCTCAGGAGAATCAAGCACTGA AGACAGAGAGTTGTCTATGGAAAAATTTAACAATTCGCCTGATGCCAAAATCTTCTTTGGCTCAATCAAAGCATGTGGAGAAGGCATATCATTGGTTGGG GCATCCCGCATCATTATTGTGGATGTTCATCTCAATCCATCAGTTACGCGCCAAGCTATCGGCCGTGCATTTCGACCTGGCCAGAAAAAGAAAGTTTTTG TATATCGGTTGATAGCTGCTGATTCTCCAGAAGAAGACGATCACAGTACTTGTTTTAAGAAGGAATTAATTTCAAAAATGTGGTTTGAATGGAATGAGTA TTGTGGTGATCGAGCTTTTGATGTTGAGGCAGTTCCTGTGAAAGAATGTGGTGACCTTTTTCTTGAAAGTCCAATGTTAGGGGAAGATGTTAAAGCTTTG TATAAAAGGTAGACCGTGTCATTATGTTCATTGGACTTGGGAAGGCCAATGTCTTTTGCTGTTATATGAGTACTTATATTGCTGGATTTTTGATTCAGAA CAAAGGAATTACTGAATTTGCTATCTCATTAGCTAGTTATATGTGACTCATCAGTGTGTTTAAAATTAAGCTGCAGTTGTTTAGTGTTAAATTGTCCTAA CTTGTTAGTACTACAACAATCAGGTTAATCATGTGTCAAATATGGCCTCAGCTTATTATGTGTTGTTTGAAATTTTACAATTGCACTTTATTGAAAGAAA TGAAGAGGTTCTTGTACATGCCTTTACTTAAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_168439; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_484766
| Blastp | Protein CHROMATIN REMODELING 35 from Arabidopsis with 63.71% of identity |
|---|---|
| Blastx | Protein CHROMATIN REMODELING 35 from Arabidopsis with 64.16% of identity |
| Eggnog | helicase(COG0553) |
| Kegg | Link to kegg annotations (AT2G16390) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019453437.1) |
| Pfam | Type III restriction enzyme, res subunit (PF04851.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |