Id Trinity | TRINITY_DN49338_c0_g1_i9 |
---|---|
Name Transcript | Ll_transcript_483430 |
Sequence | GAATGAAAAAGATAATAATAAAAGTTTCCTTTGATGGTAAGGAGAAACGACATTTCTAAGAGTAAAGAAAAACAACATCCACTTTTCATAGTATTTTCAT TCACCACATCAATCGTATTCCAATTTCCCACTTTCACAATCATCGCCCAATTTCAAACCCTAGAATCAATCTCAGATCTCCATCTCTCCCCATTCCTCTT TCTCTATCCAACGACCTTCATTTTCAGAATTGCGACTCAATTGAGTTTTGCTGCCACATTGTTTTTAAAAGATTTTTTTGGGGTTACAAATTGCAAACAA GTGTTCTTATCAATGGATGAATTATGTTGATAAAGAATTAGGAGGAGTGTATGAGTGATATGTTAAGGTGTGAAAGTAGCACTTGAATTTGCAACTAAAA ACTTATCATTAACATTTAATAATACTTGAAAGGGAGAGATGTTTTGTTGGTTTGAAATAGTGATGCTAGCTAGTAGAGAAGGTTTCCCGATGTAATGCCA CGCCCCGTTAAGGTTGAGCCAGTGGCTATGTTTGAAACTATACAGCAGATTGGTATCTATCTTCATAGGTTTCACAATCTTGACCTTTTTAGACAAGGAT GGTATCAAATTAAGATTACTATCAGATGGGAGGATAGGGAAGAAGATATACCGCATGGGATCCCAGCTAGAGTCGTTCAGTATGAAGCTCCTGATCTAGG TCCTAGCAGCATATATGGCTTGTGGAGGATTGATGATACAGACAACAGTTTCTCAACACAGCCCTTTCGGATAAAATATGCTAGGCAGGACATTCATTTA TGTATGATGATCACATTCAATTTAGCTCGTAGTAGATTTGAGGATTTATCTACAGCTGCTGCTATTTTGAAATTTGAGCTTATGTATGCTCCCACAGTTG AGAACGGTGCCGACTTGCAAACTTCTCTGGATGATTACCCCGCTGCTGTCCATGAGTTCAGAATTCCTCCTAAAGCTCTTCTAGGATTGCATTCATATTG TCCTGTCCATTTTGATGCTTTACATGCAGTGCTTGTTGATGCAAGTGTACATGTCAGTTTATTGAAAGCTGCCTCTTACCCATCTGCATCAAAGAAGACC AGAAATTCTGCCAACACTGAGGTCATTGTAGATAAAAATCATGACACATTGAATCATGTATGTTCAGAACATTGGATGCCTCCTTTTGGAAATCACCATT GCAGTGTTGATCAGGGCGACTTTGTGCAAAATATTGATTTCAATTTTTTTTTCGCAATCTTTTATGTGTGTCTTTTGCTTGCTTTATATCTACACTTGGG TACAAGCAGACTAGCATATTACTTGCTGCTCATGCAAGTTATTGTGTGCTTGTATGACCACTTCTACTGCGTCCATCTGTGCATAATCACAAGCGGAGGA GTTCTTATCTGCATTCATTCACTTCTGCACTAGAACATTTGTTTCAGTAGAAGTACATGCACATATTTTGTTTTATGTGAACTGCATTTTCTGTTTTTGC ATATCATTCTATCCTTTCTTTTCTAGGTTATACATTGAGTATCATCTGAACCTGTTTCGTTATCTATCATGCTTAATTTAACGGAACAGTAGATTTCCAT ATAGACTTCATTTATGCCTAAAAAATATATTTGCAGAAAAAAGTAATCAACATATATGAATGTGAGAATAAACATGATAGAAAGAGCTCTAAGTTCTTAC ACGACCTGAAGTCCTTGATAGCAGATACCATGTTACGCATTTGCCTCTCTACAACATAGTATAGACCAAGTTTAAGTTTGAGATTTTATGCCTCTAAGTT CTAGTAAAAAGCTTTTCTCCTGTTCTGATAATGTGGTGAAAATTATTTAACATATGTTGGAGTATGTCAATCAAAATGTTTGTAGCTGTATTCATGTCTT AGTAATTGGAGATACTGCAGGTGTGGGTTCCTGTCCATTTTAGCATATATTTAGCCCTTGTTAGCTGGATATTCTTCAAGCATTAAAAATGTGCTTTATG TGACTGACCAGGACTTGGGTGGAGTTGCTTCTGTAGATGTGAAAAATGTCATACTTGTTAAAGCATTATTAACTGCCCGTGGTATATTGCTTGATGAACT ACAAAGAATTAGCAAAGCTGTTGACCAAGCTATTGATATTTCAGATTTTTTGTTGAAAATGAATAGTACGAAGTTATTAAATTCATTGTTGCAAGCAAAT CAGTTTGCAACAGATGTTGAAGTTTCAGGAGAAGGCCAACCACAGACTGGTCTTGAGGATGAAAATGGTGCTCTGGATTTTCTGAATGCTGAAAAGCTAT ATTCCTTGTCTCAGAATGAACTGTTGGACTGTTTTCATTTACTAGGAGATCAACTGTTCTATTTATGGAACATTTTTTTGAAGTTTCATAGGTTGCTTCA TATCCCGTATCATTAGATTCATTACAATTCAATAAAGATGCACGATTCTCTAACTTTTTCATCTGATTAATGTATTAACTTTATTTTTCTTTTTCGGTCT TTATACTTCAAAAAGTTCGATAGATTAATTGGTTAAGTTTTTTGTTTCTTCATGCATTTCAATCACAAAAATATATAACTCAGTTTTGAAAAGCCAATTT AGTAGATGGAACAGTTTCAGATGGTTGCTAAATGATTCCAACCTTGTTCCACTCAATTGGGCATTTTCAGAAAATATTTCCACATTGATGATTATAACGA CAACTCCGTTTTCCGGATTTTACATGCTGACTCATAACAAGAAACGAGTCTAATTTACTGCTTGAGAATTACAAGTTGTGCATGGATCATTCCCAAAATG TATAATTCCTGAAAATATTTTGTTTAATAAGCTAATATTACTTCTTCCTAGGGATAACAAAACAAAGATTCTAGAATTTTTACATGATGCATGGGCCAAG GATCGAAAAGCTGAGTGGTCAATATGGATGGTGTACTCTACAGTAGAGATGCCTCATCATTATATAAATAGTGGGAGTGATGAGTCTTCAAATCAAGGTG GACATAAAAGAGTTCCCAGTGTGGTGAAGTCACCTGATGAGCCCCCTCAAAGTGCAGCTTCACGTGCCGAACTTCATCGAAGGAGCATTGCACAAATGCA GATTAACAACAGGTCAATTCAAGACATGTATATATTTGGAGAACCATTACGTGTTCCAATTGTGATTGTTGAACGTGTAATGAATACTCCACGACGTAAT AGCAATCAAAATTCATACCTGAGACATATGCAAACTGAGCCTAGCCCTGATACTATAGGCAAGAAATCTGCACCAAAAAGTAATGCCCGTTTGTTGAAGA TAGTTGTCTTTGTGCATGGGTTTCAGGGACACCATCTGGATCTACGACTTGTCCGGAATCAGTGGCTTTTGATGGATCCCAAAGTAGAAGTTCTTATGTC AGAAGCTAATGAAGAAAAAACATCTGGAGACTTCAGAGAAATGGGACAAAGGCTAGCTCAGGAAGTTGTTTCTTTTGTTAAAAACAAAATGGACAAAGCA TCAAAATATGAGAATTTGGGAGATATTAAAATTAGTTTTGTTGGTCATTCTATTGGTAACCTCATTATAAGAACAGCAATTGCAGATGACATTATGGAAC CATTTTTAAGATACCTTCATACATATGTTTCAGTATCTGGTCCACACTTGGGCTATCTTTATAGTTCAAACTCATTGTTTAATTCTGGATTATGGTTTTT CAAGAAGCTGAAAAACACACAGTGCATTCATCAGCTCACCTTCACAGACGATCCAGATTTTCAAAATACGTTCCTGTATAAACTGTGTAAGCAGAAGACA TTGGAACATTTTAGGAATATTATCCTACTATCTTCTCCTCAGGATGGTTATGTGCCTTACCATTCTGCTAGAATTGAGTCATGCCCGGCTGCTTCACATG ATTCTTCAAAGAAGGGAAGCTGCTTCCTAGAGATGCTGAATGATTGTTTGGACCAAATCCGTGCCAATCCGTCTGAACATCGAGTTTTCATGCGTTGTGA TGTCAATTTTGATGCCACTGCCTATGGCAAGAATTTGAACTCATTCATTGGGCGGGCAGCACATATCGAGTTTCTGGAGTCTGACATTTTCATGAAATTC ATAATGTGGTCTTTTCCAGAGCTATTTCAATAGCAGTTGCAGTGATTTTCTGCCTCCTCTACACTGCATCCGTGTGTTCGAAATCGCGTATTGGCTTCCG AGACCACAAGTGCTCAAGTTTCCATTATTCAAAGAATGGGTTGGCAGGCACATAGAGCTGCAGATTTAGCTGGCTTCAAAATGCTCACTTTAAACACGGT TGTATACATGATAGCTTTAGGAAGGGTCAAAAGAAGCATAGTGATGTAATTACTTTAGGTTAGGTAGGTTTCTAAATATTCAATGTTATATGCCTCAACA CATTACATATCAGAAGCTGGTAAAACATTGGGATGTGGGTGGGATTTTGCATGCAATGAGCACATATCGAACAGAGATCTGTTGTCCTAAATCTTGTCAC CGCTTCATCATAATGAACCAAAACATTGATAATAATGAATGTTTAAAATAAATTAATTGACATGACATATTTTCATTGGTGCAAAACAAGATTTGGTCCA ATAGATCCCTGTTTGCACATAAAATTATAAGTGGTAAGTTTATTAGTTTTCTGAATTCATTAACAAATTTGTTTGTATAATTAAATGCTGAGTGCAAATG AAGAATACTATCAAAGTCCAATATATTTGGTAGATAATAGTATCCTTTAATCATGATATCAGGGTTCAATTGTATTTATTTGTTTCATTCAATT BLAST |
Tissue | pods |
Gene name | LI_gene_168503; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_483430
Blastp | Protein FAM135B from Xenopus with 40.88% of identity |
---|---|
Blastx | Protein FAM135B from Xenopus with 40.88% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (447696) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019415413.1) |
Pfam | Putative serine esterase (DUF676) (PF05057.13) |
Rfam | - |
GO | - |