| Id Trinity | TRINITY_DN49350_c1_g3_i4 |
|---|---|
| Name Transcript | Ll_transcript_482301 |
| Sequence | AAGGAACTGAAGCACATAAGAAAGCATGCCAACCCTCTGCATGAATGACAAAGATATTTCTGTTTTGCCTTTTTCCAGCTCTTTCAGAAACTCTATTTTT GAATAAAATGGGAATTCTATTACTGATATGCAAAGATTTTGGGCTGCTTTTTTTATTAATGTTTTTCTATATATGATATCTTCTCTGATTGTACTTTCTC TCTTTTTTCTTCTGTCATAAAACTAACTTGGTTACAAACGTTTTCACAGCCTTGGATACTGTGTTGTTAAATTAGCAACTTTAGATGGTATTGACATATG GTAATAGTGTTATCGTCTATTATGTTCTTTGCACTGAGGTGAAAAGCTTTATCATGACCTTTTCTCTTGCAGTTAGAGGTCGAAGATCATGATCTAGGCT CTGGATGCATTCTTTTACCTGAATGAGCTAGAGTCCTAGGATCTTATATAATTGACTTGTATACTAGTAGGGTGTTTCTGAAAGCATGAATTTCAATTTA ACTTCACTGCAATTAAGTTTGAGCCTCTCTAAAGCTTCAGGATGCATGTAATATAAAAACTAAGTACTGCAACTTATCTAATTCAGAACCTTATTCTTTG ACTCTCTTTTTTCTGTGTTGTACTATACTTGACTCAATACATGCTTAATATGTTTAATTTTGCAATCATGAGTACTTTGTTATCCAGACTTTTTTATGTT CATTCATTGTAAGAATAGAAAATATAGTATCCAAGTATCCAATAAAACAAATTACATTTATGATGTAGGCAAAGTATTTGTGAATGGGAAGGTGATACAT AAAGCTGGTACCCCCGTGTCTGATAAAGCTGTGGTGGATATCGTGGCTGATATTCCCAAATATGTATGTAGAGCTGGATATAAGTTGGAAGGTGCCATTG AACAGCTTGGTGTTGATGTTGCTGGTAAAGTAGCTCTTGATTCTGGGCTATCAACTGGAGGATTTACTGATTGCTTACTTCAGTATGGTGCATCACATGT TTATGGAGTTGACGTGGGCTATGGACAGGTAGCAGACAAAATTCGTAGAGATGAACGTGTATCTGTGATAGAGCGGACAAATTTAAGATATCTTGCAGGA CTCCCACAAAATGTTGATTTGGTGACTTTGGACCTCTCATTCATCTCTATTCTAATGGTCATGCCTGCTGTGGTCAATGTCATGAAGGAAGATGCAGCAT TAGTGACCTTGGTTAAACCACAATTTGAAGCTCGTAGATCTCAAGTAGGAAAAGGGGGGATAGTGAAAGACCCCAATGTCCATCAAGAGGTTCTTGAGAG GATTATAAAGGGAGTAGAGAATTTTGGTTTCTGCAGTAAAGGTTGGATTGAGTCCCCTCTCAAAGGTGCTGAGGGTAATACAGAATTCCTTGTTCATTTC AACAGAACCCATTCAACAGAACCCATAGCAAAGGTTCCTGAAATCATGAACAAATTAGATAACTAATCACATTTCATGAGACTTAAATGAAGATTGCTAG TTTGGAAGACATAACATTGCAGGAGAACTGTATTTTTGTATACTGATTTATTGTCGAAATCGTTGATGGTAGTGATGAAATTTTGTATGAACCGATATAA GAAATGACCAATGATGATGGATGAGTAAGGTAAACATGGCATTTTGAGCCTGGAAGTGGTTGTAGATGCTTGGTCACATGAAATGGTTATACATGTGTTA GTTTGATCATGCCTGTACCTTTTCCCCCTCCCAATCTAATGAAGCATAGCCCTTTATTTATATATGAATGTTTAATTT BLAST |
| Tissue | pods |
| Gene name | LI_gene_168608; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_482301
| Blastp | Putative rRNA methyltransferase YqxC from Bacillus with 41.81% of identity |
|---|---|
| Blastx | Putative rRNA methyltransferase YqxC from Bacillus with 41.99% of identity |
| Eggnog | hemolysin a(COG1189) |
| Kegg | Link to kegg annotations (BSU24260) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019449426.1) |
| Pfam | FtsJ-like methyltransferase (PF01728.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |