Ll_transcript_483381

• Id Trinity: TRINITY_DN49386_c0_g1_i6
• Name Transcript: Ll_transcript_483381
• Sequence: CCTCCTCACAAAAAATCTCATCTTTCTCACTTCAACATTCAAACCCACTTTTTCTCTTACTCAGTTCTCCTTCTCTATTTCTCCAAATTTCATTTCAATT ATTTAATCAAATTCTTATACCTTATTTCCATTTCCAAATGCTTCATTCTATTTCTTAAATTTCCCTTAATAAAAAATAATCCTTAATTTTTCCGAAACCT AGGGCATGGTCGGTGGCGGTGGCAACGGCGATGATCACCACCGCAAAATGTTCTGGCGCTCCGCCTCTTGGTCAGCCTCCCGCACCGCCGCGGCCGGAAG CACCACCACCACCAATAACCCTTCCGGCAAGGTGGGTAATGATTTCTCCGATCCCAATCCCGGCGACGGCCAGAGTCGACGGTTCCTTCTGCCGCCGCTG ACGCCTCGGTCGCAGCAGCAAAGCTCCAAGGGCAGGTCGTTCCTGCCGCCGCTCTCCATCGCTCCCCGGAGCATGGACGAGTGGCCGAAGGCGAGCTCGG ACGATATCGGGGAGTGGCTGCAGCTCCCCACCACACCTAGTGGTGGTGGTGGGAGAGGTAATAATAGTAATTGCAATAATGGTGAAAGATTGAAACTTGA TTTGTCTTCAATTCAGCAAAATCATGATAATGGTAATTATAGTAATTGTAACAATAGTGTTGGACTTGTGAAGAGAGATAAAATTGCATCTTTTGATAAG GAATGTTCAAAAGTTGCTGATCATGTTTACCTTGGTGGTGATGCTGTTGCTAAAGATAGAGATATTTTGAAGCAAAATGGAATCACTCATGTTTTGAATT GTGTTGGTTTTGTTTGTCCGGAGTACTTTAAAGCCGATTTTACGTATAGGACATTGTGGCTTCAGGATAGTCCTTCCGAGGATATTACTAGTATTCTCTA TGATGTTTTTGATTACTTTGAGGATGTTAGGGAGCAAGGTGGGCGTGTCCTTGTTCATTGCTGCCAAGGGGTTTCGAGATCAACGTCGTTGGTGATTGCA TATATCATGTGGAGGGAGAGTCAGAGCTTTGAAGATGCTTTTCAGTATGTGAAGAATGCAAGAGGTGTCACCAATCCAAACATGGGTTTTGCTTGTCAAT TGCTTCAGTGTCAGAAAAGGGTACATGCTATGCCTGCTAGTCCTAATTCTATTCTTAGGATGTATAGAGTTGCTCCTCATTCACCTTATGATCCTCTTCA CTTGGTCCCTAAGATGGTTAACCAGCCATGTTCCCAAGCACTTGATTCTCGGGGCGCTTTTATTGTCCATGTTCCTTCTGCTATATATGTTTGGACTGGT AAGAATTGTAACTGTGTTATGTCTTGTAATGCAAAATCGGCAGCTGATCAGGTTATACGTTATGAGAGGGCGAAAGGTCCAGTTATTATGATCCATGAGG ATGAGGAGCCACCAGATTTTTGGATTGCTCTTTCCAATGAGCAATTATTAACAGGTACTTGTGATAAGGCAGAGGTCGAGAAGGATGCAGCATTGGCTTC TTCTGAAAGAATGGAGATTGATGATGCAAATGATAAACGGATTCGTCCAAGGAAAGTCACTGACTATGATTTAGATTTTGAGATTTTTCACAAGGCACTT GCTGGTGGTGTTGTTCCACCTTTTTCTGTGTCTAATGCTGAATCAGAAACTTGCCTTCCCGCTAGAGAACACGGTTGGGGGAGATTGAGGAGGAAGCTTG CTAGCGGTCTCATGAAAGGACTGTTCACAACCTGCAAAAACACAACCTCGTCCAAAGATGAATCGTCTGTTATCATGGAAGAAGAAGAAAAACAACACTC TATTGTTGATCTTTCATCACCATCATCAAACCATCCTTGTGGTTCACCGGATTCATTTGAATGTTTTCCGGATAACAGCTCAGACAGGGCAAAAGATACA CTTGAAGTATTGGACCACTTTGTTCCTAGTGTTGATTCATCCCTGCCACCATCTCCTGGAGGAATGTCGGATTCCTTTGCTTGTTTCCTAAGCAACAGCC CAAAACTCAGTTCCAAGTCACCAACGCTTTCACCTTCAAGTTCTGATTATGCTAGTTCATTTACATTTTCACCTTCATCAACAAACTGGTCTTCTCGTCT GCCATCACCTTCTAGCCTGGAATCAACTGAAGCCTTTTATGGCAAAGATGCATCTTTCTCAGATGGTTTCTTTTCACTTCAGAAAGAAGCCATCTCTTCA CCTTCGGGGGCATTTTCAGCTAATCACACATTTGAAGGAGCAAACTTCTATTTTCCGAGCAAAGGATCTTCGCCTTCCATTGCAGAGCGCCGAGGGAGTA ATCTGCCACCTCGCATGGTGCTACCATCCGTCAATGAATCACCCCGTGCCCACAAGGTCTTGGTAAGATCACAGTCATTCTCTTTGCCTGACTTGGATGA TAATTTGAATAATGATGTTAGTTTCAAACAATCTGACCAAGACGGTGGAAAATGGCTAAAGACAGATGCTGATATTATTCCTATAGCTGTTGAAAATGAG AGCAATGACATAGGATCATTGTAGGATACTGTGGTGTCATGTAATATGATGATCATGCTTAAAGTAAAAGAGATTAAGAGAAACTTGACACGATGACAAT AGTTCAGTTTCTTCCTTTATAGCCTATGGTTGGGACCAAAATGATCTATTTTTGGAGGTGAATTTGCATAAGGTAGTCTGAATATTGCTGCATGTCTGCA AGGTGTACAATAGGCTGAGTAATAACTACACATAATAACATGCAGGCCTGTGCACTAATAGCATCTTCAGTACATAACAATGATTAAACTTTAGTGAATA TAAAGACTATTTCTCTTTTCTCTTGTTTTTTTCTTGTTCTTGTTCATTGAAGCCATCAGGACAGTGTGAAAGTTGCTATTGTTTTTGCATGAAAACCTAT CAAATTGGTGCAAAATGGCTACCTTCGTAGGAAATCACAAAGGAGATATCATAGGATAGCTGACATTAACTTTGTTAGTAATGTTTCCATCATCTTTTAC TAGTATATACTGTTTCCATTAATAAATTAAAATGATGTTTCAGTCTTTCATAAGCAACATTTCATTGCCAGAAGGTTTCTTCTGCTTACACGGTTTATAT GAATAAAATCAGCTAAATTTTAC
• Tissue: pods
• Gene name: LI_gene_168906;
• Additional information: details;

Expression of Ll_transcript_483381

FPKM

• PAB: 1.2
• PNAB: 1.3
• PS1: 4.1
• PS2: 0.7
• PS3: 2.1
• PW1: 2.8
• PW2: 1.6
• PW3: 1.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_483381

• Blastp: Protein-tyrosine-phosphatase MKP1 from Arabidopsis with 56.76% of identity
• Blastx: Protein-tyrosine-phosphatase MKP1 from Arabidopsis with 58.14% of identity
• Eggnog: dual specificity phosphatase(COG2453)
• Kegg: Link to kegg annotations (AT3G55270)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019464013.1)
• Pfam: Dual specificity phosphatase, catalytic domain (PF00782.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;