| Id Trinity | TRINITY_DN49388_c7_g3_i1 |
|---|---|
| Name Transcript | Ll_transcript_484219 |
| Sequence | CTTTATGAGTGGGTTTGAAATGAAAGAAGACAGAGAGGAAGATCTATATCTAAGAAAGATCCGATAGCACGTTCATTCATAGTAGGTAGTGGTTTCAGAC GCATTTTCCACTGGGTGCACATCTGTAACATAATGTGTGTTCATGTGCCATTCATTTTCATTTGTTCAAAAAAAAATATTTAAGTTAAAAAATTAATAAT TAATTATTTTCTCATTGATCATAAATTGTGACACGTGGAGTGATACACTTCTGTGGGATAGATGTTCATCATTTACAGTTGAAATGAATGTGAACGTGAA GTTATTGTTATTTATTACACTGAAATGAATGTGATGCTATTATTACACTGAAAAGAGAGAGAGAGAGGGAGAGAGATAGAGAGAGAGATGGAAGAGTCGA AGAAGAAAGCAACGATTCTGATAACAAACGACGATGGAATAAACGCTCCTGGTTTAAGAGCATTGGTTGAGAGTCTGGCGGAAACGAATGAATTCAACAT TTATGTAATCGCTCCAGATAGTGAGAAGTCATGTATTGCTCACTGCATTACTTGGCTTCACCCTCTACATCTCAACCTTACTCATATTCATGGAACCATC TCTTCCTTTTCCGTTTCTGGTTCTCCCGCTGATTGTACTTCCCTCGGAATTTCCAAAACACTCTTTCCCACTGTTCCTGATCTGGTTATCAGTGGCATAA ACAACGGTGACAACACCGGCTATGACATTTTTTACTCAGGCACTGTAGCTGGAGCTCGTGAGGCCTTCTTCAATGATATACCTTCTATGTCCATTTCTTA TTACCGCCCTGATTGGGCTGAGGGTAATAGTAAGATACATGACTTCATCCTTGCTGCACAAGTATGCGTGCCTATCATACGTGCTGTTCTGGTTGAGATA AAGAACCAAAGCTACCCTCGAAGATGTTTTTTGAATATAAATGTGCCAAACAATGTTGCAAATCATAAGGGTTATAAGCTGACCAAGCAGGGTAAAAGTA TTTGCAAAATGGGATGGAAGCAAGTCACCTCTGAGACAGAAGGACAGAGAATGTCATCTAATAGGACCAATATAAATACAGAACCACCTAAAAAAAATGG CACAGTATCATCTGTATCTCCAGAACATCTTTTGTTTCTGAGAGAGGTGGGTTCATTTACTGTCTTTTTATTTACTTGAATCTCGATATTTCATTTATAA GTAGGCTATCATCCAGTACCTTCAGATGAACTCCTCTATTTGTCATAAGTTCTGCATACCTTCGTAGTCTTGAGCTTCAGTGTACTTGTTTTAGTCAGTC TCAGAAGGCACTGTAAGTGTCAGTTTTGTCAACTTCTGAAGTAGATGCCTAGTTATATTGGAAAACTTAAGTCCTTTACCATCTTAGTTGGATTGACATT CCTAACTAACCTTAGTTCCCTCCTCTTTTTCCCAAAGAAAATAAGACAGTACTTTTTTAACTAATGCAGGTAATAGGTTATACACTTGATGATGATGATG GTACCGAGTACAAATCTTTGCAAGAAGGATATATTACTGTGACTCCTCTTGCTGCTCTTTCTGATGCGGAGTTCAATTGTCAGACCTTTTTTAAGGAATG GCTAGGAAGTGTCTCTGAACTCTCCTCTTCATCGGCATTATAATGTTGTAAGAACTATCATGTGTTTGTAGCTTATATGATAGCTTTAGTAATATTTTCA ACAAATGTAGCTTCCTTTCTAATTTGTGGTGAAAGTGACTCTTGATAGATGAACGGAATATTTAAGCAAGGTTTTAAATAAAATAGTGTGTTGTAATGAC ATTACAGAGCCAAGTTATTATAGTGAGGGTGTAATTGACATAGTATTGGTTGCTATTGTGTGATTTTGAGCCATGTACCCCATCCCCATTCCATTGAGTT TTGCTACAACGGGCAGGTTTCACATATCATCTCTCCCTCTTTTTATATTAAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_168927; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_484219
| Blastp | 5'-nucleotidase SurE from Sulfurimonas with 42.02% of identity |
|---|---|
| Blastx | 5'-nucleotidase SurE from Sulfurimonas with 42.7% of identity |
| Eggnog | Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates (By similarity)(COG0496) |
| Kegg | Link to kegg annotations (Suden_1536) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_013453323.1) |
| Pfam | Survival protein SurE (PF01975.16) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |