Ll_transcript_484221

• Id Trinity: TRINITY_DN49388_c7_g3_i2
• Name Transcript: Ll_transcript_484221
• Sequence: CTTTATGAGTGGGTTTGAAATGAAAGAAGACAGAGAGGAAGATCTATATCTAAGAAAGATCCGATAGCACGTTCATTCATAGTAGGTAGTGGTTTCAGAC GCATTTTCCACTGGGTGCACATCTGTAACATAATGTGTGTTCATGTGCCATTCATTTTCATTTGTTCAAAAAAAAATATTTAAGTTAAAAAATTAATAAT TAATTATTTTCTCATTGATCATAAATTGTGACACGTGGAGTGATACACTTCTGTGGGATAGATGTTCATCATTTACAGTTGAAATGAATGTGAACGTGAA GTTATTGTTATTTATTACACTGAAATGAATGTGATGCTATTATTACACTGAAAAGAGAGAGAGAGAGGGAGAGAGATAGAGAGAGAGATGGAAGAGTCGA AGAAGAAAGCAACGATTCTGATAACAAACGACGATGGAATAAACGCTCCTGGTTTAAGAGCATTGGTTGAGAGTCTGGCGGAAACGAATGAATTCAACAT TTATGTAATCGCTCCAGATAGTGAGAAGTCATGTATTGCTCACTGCATTACTTGGCTTCACCCTCTACATCTCAACCTTACTCATATTCATGGAACCATC TCTTCCTTTTCCGTTTCTGGTTCTCCCGCTGATTGTACTTCCCTCGGAATTTCCAAAACACTCTTTCCCACTGTTCCTGATCTGGTTATCAGTGGCATAA ACAACGGTGACAACACCGGCTATGACATTTTTTACTCAGGCACTGTAGCTGGAGCTCGTGAGGCCTTCTTCAATGATATACCTTCTATGTCCATTTCTTA TTACCGCCCTGATTGGGCTGAGGGTAATAGTAAGATACATGACTTCATCCTTGCTGCACAAGTATGCGTGCCTATCATACGTGCTGTTCTGGTTGAGATA AAGAACCAAAGCTACCCTCGAAGATGTTTTTTGAATATAAATGTGCCAAACAATGTTGCAAATCATAAGGGTTATAAGCTGACCAAGCAGGGTAAAAGTA TTTGCAAAATGGGATGGAAGCAAGTCACCTCTGAGACAGAAGGACAGAGAATGTCATCTAATAGGACCAATATAAATACAGAACCACCTAAAAAAAATGG CACAGTATCATCTGTATCTCCAGAACATCTTTTGTTTCTGAGAGAGGTAATAGGTTATACACTTGATGATGATGATGGTACCGAGTACAAATCTTTGCAA GAAGGATATATTACTGTGACTCCTCTTGCTGCTCTTTCTGATGCGGAGTTCAATTGTCAGACCTTTTTTAAGGAATGGCTAGGAAGTGTCTCTGAACTCT CCTCTTCATCGGCATTATAATGTTGTAAGAACTATCATGTGTTTGTAGCTTATATGATAGCTTTAGTAATATTTTCAACAAATGTAGCTTCCTTTCTAAT TTGTGGTGAAAGTGACTCTTGATAGATGAACGGAATATTTAAGCAAGGTTTTAAATAAAATAGTGTGTTGTAATGACATTACAGAGCCAAGTTATTATAG TGAGGGTGTAATTGACATAGTATTGGTTGCTATTGTGTGATTTTGAGCCATGTACCCCATCCCCATTCCATTGAGTTTTGCTACAACGGGCAGGTTTCAC ATATCATCTCTCCCTCTTTTTATATTAAT
• Tissue: pods
• Gene name: LI_gene_168927;
• Additional information: details;

Expression of Ll_transcript_484221

FPKM

• PAB: 30.9
• PNAB: 61.1
• PS1: 59.3
• PS2: 45.2
• PS3: 70.5
• PW1: 19.4
• PW2: 16.1
• PW3: 13.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_484221

• Blastp: 5'-nucleotidase SurE from Sulfurimonas with 32.77% of identity
• Blastx: 5'-nucleotidase SurE from Sulfurimonas with 33.22% of identity
• Eggnog: Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates (By similarity)(COG0496)
• Kegg: Link to kegg annotations (Suden_1536)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_020221296.1)
• Pfam: Survival protein SurE (PF01975.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;