Ll_transcript_482623

• Id Trinity: TRINITY_DN49389_c8_g1_i11
• Name Transcript: Ll_transcript_482623
• Sequence: ATTTCCTATCCCAAGAAAAGTTGCATTGTCTTAGACAGTCCAAAATTGAGATTCTGAAGAGTGGCTAAGATTGTTTCTCTACTCTCCCCTTGTCCGCTTC TCACTCTCTTTTCAATCTCATCTTCCTCTTTTTATCCTTCTCTTCATTTCCATTTCTTACTCAACCTTCCTTTCATCTCTTGCTACGTCACAACGTTCTT TCCTACAACATCTTCATATAATACCATTCAAACACGACATCTTTAAACACATTTTCTGTTCCTAGTTAGCTCTACCTGTTGTTCTAGATTGCATAGATCT GCATGTCCATGTGCCCATTATCTATTATTCCATAATAAGTAGAGAGAGAGAGAGAGAGAGAGTATTTAATTATCTATTGATGGTTGAAGCTGAATCAGCA AGAATCTGAACAATCTAAGAGAAGGAGAGAGAAAAGGTTAAATCTTTATTATAGTTGAAAGTGGTTGTGACGGATCCATCAAGAGAAGAGAGTGGTGGAG GGTGTAGTTGTTTAGGACTGGAGTGCATTTACTCAATCCTAAGTGCTCTTAGAATGGGTTCCTGCTTCTCTGTAGAAAGCAGGAGCCCACACCCAAGTTA TAGGAAGAACTCCAACAACAAGCATGGATCACACACTTCTTCCATTCAGTACTGGAAAAATGAACCACTTCATAGGCTCCCTTCTAGGATCTTCCTTAAT GCCTCTACCCAATTTGCTTCCTTGTTTACTCAACAAGGCAAGAAGGGAACCAATCAAGATGCCATGCTTCTTTGGGAGAACTTTTGTTCTCGGCAAGATA CAACTTTCTGTGGAGTTTTTGATGGTCATGGTCCGTATGGTCACATGGTTGCGAAAAGAGTGAGGGACTCTCTTCCTCTAAAACTGAATGCTCATTGGGA ACATTGTGTGTCTGGTGATGAAGTCCTCAAGGAGATCACTGTTAATGCTGCTGGAAGCATGAATTCGGAAGAGGCCGCTATTGTATCTGCTGATGAGGAA TCTAGGACATCCATTGACGCCGAGGAATCGACGAAACACCCAGAAATATTTCAGACACTTAAGCAGTCCTTTTTGAAGGCATTCAAAGTTATGGATAGAG AACTAAAGACACATCAAAGTATTGATTGCTTTTGTAGTGGGACAACAGCAGTCACTCTTGTTAAGCAGGGTCGTCATCTTATTATCGGAAATGTTGGGGA CTCTAGAGCTGTGATGGGTACAAGAGCTAAAGATGACTCTATTGTTGCAGTCCAGTTAACTGTAGATCTAAAACCCAATCTTCCAGCTGAAGCCGAGAGA ATTCGTAAATGTAAAGGACGCGTCTTTGCTCTTCATGATGAACCTGAAGTTGCTCGAGTTTGGTTACCAAATAATGATTCCCCTGGTCTTGCCATGGCAC GTGCATTCGGAGATTTTTGTCTTAAAGATTTTGGCTTGATATCTGTTCCAGATGTATCATACCGCCAACTCACCAAGAGTGATGAGTTTGTCGTCTTAGC AACAGATGGGATTTGGGATGTGCTCTCAAACAAAGAAGTCGTAGATATTGTCGCTGCAGCTCCGAGTCGTTCCTCAGCAGCTCGAGCAGTGGTCGAGTCA GCAGTTAGAGCTTGGAGATATAAGTATCCAACTTCCAAAGTAGATGACTGTGCTGTGGTTTGCCTCTTTCTGGACTCAGACTTGCACCCAATGTCCAGCG CTTCCAATGCCAAATCCAACGAGCGGCCTATTTCGGCAGACCAAGTCAGCAGTCCTGGTGGAGCTGTTTCTGGACCTACCATTCTAAAAGGATCAGCAAC TTGCAGGGCAAGCAACGACACGTCACTTGGAGAAAGCAACGACGAAGTGTCCAAGGAAGAGGAGATCGATGCTGAGTCGGAAAAAGATTGGTCTGCTCTT GAAGGAGTATCGCGTGTAAACACATTATTAAATCTCCCAAGATTTGTCCCTGACAAAGATGACAAAGCTGCAGCAGGGATGAGAAAACGCAAATGATTCA AGAGTGTCATATTTTTTTGTTCCTATCTTTACTACAGATACATACATTTTATCATTTGTTTTTTTTTTCACTTTCAATTGCACTAATTCCTGTTTCTACC TTTTAAGTTTTTGTAAAATCAAACTCTTCATACTAAAATAATATTTTGAAAGGGCTTACTTTAGTGTGCCTATCATTAATTTATGGGTACATCTTAAGCC ACAGGAAGACAGTAAAGTGTGAAAAATGACATGCCCCATCATATCGGATGGAGATCAGCTGTCCCAAAGCATGTCCCCAACTAAGTACCAAGCCAATCAG AATGAAGAAAAAATAAATAAAAATATGAATGTTTAACTTTTTTAACTGATGTGACATGTTGTTATTGGTTTGGGAC
• Tissue: pods
• Gene name: LI_gene_168944;
• Additional information: details;

Expression of Ll_transcript_482623

FPKM

• PAB: 12.9
• PNAB: 17.4
• PS1: 15.2
• PS2: 13.3
• PS3: 12.4
• PW1: 12.5
• PW2: 15.1
• PW3: 14.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_482623

• Blastp: Probable protein phosphatase 2C 33 from Arabidopsis with 64.23% of identity
• Blastx: Probable protein phosphatase 2C 33 from Arabidopsis with 64.23% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (AT3G02750)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019431642.1)
• Pfam: Protein phosphatase 2C (PF00481.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;