Ll_transcript_482613

• Id Trinity: TRINITY_DN49389_c8_g1_i2
• Name Transcript: Ll_transcript_482613
• Sequence: ATTTCCTATCCCAAGAAAAGTTGCATTGTCTTAGACAGTCCAAAATTGAGATTCTGAAGAGTGGCTAAGATTGTTTCTCTACTCTCCCCTTGTCCGCTTC TCACTCTCTTTTCAATCTCATCTTCCTCTTTTTATCCTTCTCTTCATTTCCATTTCTTACTCAACCTTCCTTTCATCTCTTGCTACGTCACAACGTTCTT TCCTACAACATCTTCATATAATACCATTCAAACACGACATCTTTAAACACATTTTCTGTTCCTAGTTAGCTCTACCTGTTGTTCTAGATTGCATAGATCT GCATGTCCATGTGCCCATTATCTATTATTCCATAATAAGTAGAGAGAGAGAGAGAGAGAGAGTATTTAATTATCTATTGATGGTTGAAGCTGAATCAGCA AGAATCTGAACAATCTAAGAGAAGGAGAGAGAAAAGGTTAAATCTTTATTATAGTTGAAAGTGGTTGTGACGGATCCATCAAGAGAAGAGAGTGGTGGAG GGTGTAGTTGTTTAGGACTGGAGTGCATTTACTCAATCCTAAGTGCTCTTAGAATGGGTTCCTGCTTCTCTGTAGAAAGCAGGAGCCCACACCCAAGTTA TAGGAAGAACTCCAACAACAAGCATGGATCACACACTTCTTCCATTCAGTACTGGAAAAATGAACCACTTCATAGGCTCCCTTCTAGGATCTTCCTTAAT GCCTCTACCCAATTTGCTTCCTTGTTTACTCAACAAGGCAAGAAGGGAACCAATCAAGATGCCATGCTTCTTTGGGAGGTTTGCTTTTTACCCACACCCA AGAGGTTTTCTTTATTTTGCACCTCCCATTTTGTTTATTGAATACTCAATTTCGTTGTTAGGAGTCCCACATCGAGTAGAATAACAATCTCAATGCAGTA CTTAAGCCATGAGACTCCCCCACCTAATAGATTAATCTTTTGGGTTGAACTCTCTTCGTGTGCTTAAGTCCTAACAATTGGTGTCCTTCATTGAGATTTT TCTGAGGACCAAATTGATTGTTGTGTTATTTCTACTTTCTGGTGATTTGGCTGTGGTCTGTCTTAACTAAGGAGGGTGCTCCCATGGTTTCCTTTCACTA TATATCTTTATTCAACTATGTTTTTTTCTGTTACAAACTTACAGTATTTGGTTTTGATTATTTGCATCAAGGATTTGATGCAGTGATATTTTATTCTTCT CTGCTGAGATCACATGGTGAAAGACGGTGGATCACTCAATTCCGGAAAGATCTTAGTTTGTTTCCTCACCCCTCGAGAGAATTGCATGAAAATTGATCTG TTGTCAGTTGAATTATACGGAAAATTATATGTTGAATTGATGCCCTTCTATGTATTTTACTACTATACTGTAAGGATTTACATTTTTTAGGTTGGGAAAT GGGGGTCACTGATCTCTTGGTACCTGTTTCTGGACTAATAGGAATTGTTGATATACATTTTTTCTTCTGTTGAGTAGTGTTTTCACTGATTCTGCTCATC TTGTATTGCAGAACTTTTGTTCTCGGCAAGATACAACTTTCTGTGGAGTTTTTGATGGTCATGGTCCGTATGGTCACATGGTTGCGAAAAGAGTGAGGGA CTCTCTTCCTCTAAAACTGAATGCTCATTGGGAACATTGTGTGTCTGGTGATGAAGTCCTCAAGGAGATCACTGTTAATGCTGCTGGAAGCATGAATTCG GAAGAGGCCGCTATTGTATCTGCTGATGAGGAATCTAGGACATCCATTGACGCCGAGGAATCGACGAAACACCCAGAAATATTTCAGACACTTAAGCAGT CCTTTTTGAAGGCATTCAAAGTTATGGATAGAGAACTAAAGACACATCAAAGTATTGATTGCTTTTGTAGTGGGACAACAGCAGTCACTCTTGTTAAGCA GGGTCGTCATCTTATTATCGGAAATGTTGGGGACTCTAGAGCTGTGATGGGTACAAGAGCTAAAGATGACTCTATTGTTGCAGTCCAGTTAACTGTAGAT CTAAAACCCAATCTTCCAGCTGAAGCCGAGAGAATTCGTAAATGTAAAGGACGCGTCTTTGCTCTTCATGATGAACCTGAAGTTGCTCGAGTTTGGTTAC CAAATAATGATTCCCCTGGTCTTGCCATGGCACGTGCATTCGGAGATTTTTGTCTTAAAGATTTTGGCTTGATATCTGTTCCAGATGTATCATACCGCCA ACTCACCAAGAGTGATGAGTTTGTCGTCTTAGCAACAGATGGGATTTGGGATGTGCTCTCAAACAAAGAAGTCGTAGATATTGTCGCTGCAGCTCCGAGT CGTTCCTCAGCAGCTCGAGCAGTGGTCGAGTCAGCAGTTAGAGCTTGGAGATATAAGTATCCAACTTCCAAAGTAGATGACTGTGCTGTGGTTTGCCTCT TTCTGGACTCAGACTTGCACCCAATGTCCAGCGCTTCCAATGCCAAATCCAACGAGCGGCCTATTTCGGCAGACCAAGTCAGCAGTCCTGGTGGAGCTGT TTCTGGACCTACCATTCTAAAAGGATCAGCAACTTGCAGGGCAAGCAACGACACGTCACTTGGAGAAAGCAACGACGAAGTGTCCAAGGAAGAGGAGATC GATGCTGAGTCGGAAAAAGATTGGTCTGCTCTTGAAGGAGTATCGCGTGTAAACACATTATTAAATCTCCCAAGATTTGTCCCTGACAAAGATGACAAAG CTGCAGCAGGGATGAGAAAACGCAAATGATTCAAGAGTGTCATATTTTTTTGTTCCTATCTTTACTACAGATACATACATTTTATCATTTGTTTTTTTTT TCACTTTCAATTGCACTAATTCCTGTTTCTACCTTTTAAGTTTTTGTAAAATCAAACTCTTCATACTAAAATAATATTTTGAAAGGGCTTACTTTAGTGT GCCTATCATTAATTTATGGGTACATCTTAAGCCACAGGAAGACAGTAAAGTGTGAAAAATGACATGCCCCATCATATCGGATGGAGATCAGCTGTCCCAA AGCATGTCCCCAACTAAGTACCAAGCCAATCAGAATGAAGAAAAAATAAATAAAAATATGAATGTTTAACTTTTTTAACTGATGTGACATGTTGTTATTG GTTTGGGAC
• Tissue: pods
• Gene name: LI_gene_168944;
• Additional information: details;

Expression of Ll_transcript_482613

FPKM

• PAB: 6.4
• PNAB: 4.1
• PS1: 1.6
• PS2: 1.7
• PS3: 1.8
• PW1: 2.1
• PW2: 2.3
• PW3: 1.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_482613

• Blastp: Probable protein phosphatase 2C 33 from Arabidopsis with 65.45% of identity
• Blastx: Probable protein phosphatase 2C 33 from Arabidopsis with 66.1% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (AT3G02750)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019431642.1)
• Pfam: Protein phosphatase 2C (PF00481.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;