Ll_transcript_354720

• Id Trinity: TRINITY_DN49422_c1_g1_i18
• Name Transcript: Ll_transcript_354720
• Sequence: CATCACTTCACAATTCACACAACACTATAATCCCTAAATCCCTAATCTCTTATCTTCTTCTTCTTCAACCTTCGGCAGCAACAACAAAAAATGTCTCATT TCGGAAGAACTGGTCCTCCAGATATCTCTGACACTTACTCTCTTCTCATTCTCAACATCACTTTCCGTACTACTGCTGATGATTTATTCCCTCTGTTCGA TAAGTATGGCAAAGTTGTTGATATCTTTATCCCCAAAGATCGAAGAACTGGTGAATCGAGGGGTTTTGCATTTGTGCGTTATAAGTATGCTGATGAGGCT TCAAAGGCCGTGGATAGGCTCGATGGAAGAATGGTTGATGGTCGCGAAATAACTGTTCAGTTTGCAAAGTATGGCCCAAATGCTGAGAAGATTCACAAAG GAAGGATTATTGAAACATCCCCAAAACCAAATTCAAGGCACAGGTCAAGGAGCCGCAGCCCCAGGAAAAGGCATCACGATGACTACCGAGACAGGGACTA CAGGAGGAGAAGCCGCAGCAGAAGTTATGATAGATATGAACGTGACAGATACCGTGGGAGAGACAGAGTTTATCATCGCCGAAGCAAGAGCCACAGTCCC AGTCCGGATTACAAGAGTCGTAGAGGGGGACGCTATGATGATGAGCGTCATAGCAGGAGCCTGAGCTGGTCTGTGGATAGCCGTTCCCCTGCCCGACACC GTCCTAGTCCTCAAAGGAGTCTTTCCCCAAAGAAGAGTATTTCCCCTCCAAGGATTGCTTCCCCAAGGAAAAGTCCACGGGGTGAAAGTCCTGACAATCA TAGCCGTGATGGACGACGGTCTGCTTCACCTCGCAGTGTCTCACCACATGGTCACCCTGATGCTTCGCGAAGCCCATCCTCTCGAAACTCCAATGGTGAT GAATGAGCTCTGTTCTTAATGAAAAATTCTGGAGACTCGTTGAGTACTGCACTTGTAGCTGTTTTGGGAATATAGCATCTTTTGTCCATTGTCAATGGTA CTTATCAGAGTCATTGAAGGATTTTATGATCTATGTGCTATTTGGTAGGGTCAGATTTCCTTGGTGTTTGAATGTTTCTACATTTGGACTTATTGTGTTT TCTACATTTGGTAACTATTGGACCTTGTGGTTGATTTGTTAATATTTCAGTATATGAAGGATTTTGCCATTTTATTTACAGTCAAGTGGTTGCATTTTTC TTTTATTTCTCCATTTTCTTATACCACTTTAAAAGGAAAGTTTGTAATCTAGCTCAGTTAATTTATAAACAACTTATTGGGTTTTATAGTTATGATCGGG AAAAGTGATGAGGGCCTGATAGGCGCTTGTTGACATGGTTGCTGTTGATGCTGTTTTTATGTCATTGATGATTGGTCGTGAATTTGATGCTGTTTGCAAG AGTATGCTGGTTTTAGAAGTATGATTGTTATACCAGTGTGCTGATTTGGCAGACAATTAGTTGATTTGGTTTTTCCTGATCGATCTAATTGGTGGTAAGA TTTTTGGTTTTCATTTTTCTTATGAAATCCCTCATGATGATTGATGATTCTGATCTTTGATCTGGTAACCATGTCTGGTCTGTATCAACGAATCCTGAAA GGGATTATTGGTGCTGTGATGGACACAAGTAGAGCATATTTTGACATGTAGCTGATGCCTGATAGGAGTTGCACCTGTCATGTGTTGATTCAGCTGCAGA TAAACCTTAACTGTGGCACTAAATATGAACCGTAAATAGCTATTGTTATTTCAAATAATGAAAGGGACAACGGTAACATATTCATGGTTACATTTTTGTG CATTTTAGTCCATATTATTTAACATTGACCTTGGAAGATTATAACATCTGCTACTTAATGTAGTGAGATATGTATCGCGCAGCAGCATGACAGTAGGTCT GTAGCTGTGAAGTGATAGCCAATGCATCTTTTATTTGAAATACGTTGTTCGTGAATAGTTTGAAGAATTGACCAGTTACTGTAGCTGAGTGTTGCTGCCC TTTTTGCTGGGGTCGGGTTGTCAATGTTATTAGTGGTTATTGGTGATGGCTGTCTAGCTGCGCTGCTGGTTTCTGTTGATTCCGAAGTCACCGGAAAATC ATTTTTCCAATTAAGTGGTGATTGGTTTTATAGTTTCTATTTCAGTTCATTCATTCCTCTTGCAGCATTATAAGATTCTTGGTTTCTTGTTATTTGTTGC TATAACATTGTGATTACTATCTCGACATTGTTGTGGGATTCGGCTACAGAAATAGTGACTACCATGTCTTTTGTAGATGTGGTTTCTCCAAATTGTGTCC CTGTGTAATTGATGAACTAATTATGATTTATATCCATTTTTGG
• Tissue: pods
• Gene name: LI_gene_169229;
• Additional information: details;

Expression of Ll_transcript_354720

FPKM

• PAB: 0.1
• PNAB: 1.5
• PS1: 0
• PS2: 0.6
• PS3: 0.5
• PW1: 0.2
• PW2: 0
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_354720

• Blastp: Serine/arginine-rich splicing factor SC35 from Arabidopsis with 57.24% of identity
• Blastx: Serine/arginine-rich splicing factor SC35 from Arabidopsis with 87.04% of identity
• Eggnog: serine arginine-rich splicing factor(ENOG4111NJ8)
• Kegg: Link to kegg annotations (AT5G64200)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019433357.1)
• Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;