Ll_transcript_354139

• Id Trinity: TRINITY_DN49449_c0_g1_i27
• Name Transcript: Ll_transcript_354139
• Sequence: AAACAAGTGAAGTAAGAATCTTTTCCTACACGTTCACGAGCATCACAGAACGAGTAAGGAACACGTATATTTATTTCTCTATCTTCATTCCCACAAGTCT TCAAAACCATCACCAAACCAAACACCCCTTAATAATACAATTGCACTTCACTTCTTCATTTCACAACTATACTCTTAGGTAATACTCCACAAACCCATTC ATTCCCAAACTTGTTATCACTCATTTTATAACAATGGCTTCTTCCCTTCTTCTCCTTCCAATTCTCCTTACTGCATTAACATTGCCATTACCATTGCTGG TTTCTGCCGACAACGGTAAATGGCAGCTTCTACAGAAAAGCATAGGAATAGTGGCCATGCACATGCAATTACTACACAATGACCGTGTTGTTATTTACGA CCGCACCGATTTCGGGTTCTCTAATTTATCTTTACCCAATGGAAGGTGTCGCCATGATGATAAAGAGCTTGCTGTGAAAACGGACTGCACCGCGCACTCT GTTGAATACGACGTCGCATCGAATAGATTCAGAGCATTGTTTATCCAAACTAATGTTTGGTGCTCCTCGGGTTCAGTTTCTCCTAATGGGACTTTGGTTC AGACCGGTGGTTTCAACGATGGAGAACGTAAAGTTAGGACATATAGTCCTTGTCCCACATGTGACTGGCAAGAACTTGAAAATGGACTCGTTGCACGAAG ATGGTAATGTTTATAATTGTGAGTTACAGTCAACTATATGATTTCTTGTTTTGATAAAAATGGGATAATTTATCACTCATTTCAACAAGGATCTAACTTT TTTAGTTTTGGATTTGGATAGACAAGAGTATCACATTTCTCAAAAAACTAGATTTCTCTTCATTACTCAATGAAGCAATTACACAAATAAAATTTAACAA TCTATTAAATAATTACATTTTTATCTTTTAACTTATAACAATATTACCTTTTTACCATTAAAATTATACTAAAAAGGATAATTGGCCTCTCAATTACTGA AGAGGAGGCTGACTCCGTATGGAATAGTAGGTAGCATAGTGCTATAAAGGATAAACTCTCACTATGTGCATTGTGTAGGGAAGGGTTGGACCCATTTTAT GGCTCTGTATTAGGCAGCCTTACCTTTTGTTGATACGAGATTGAGTTCACCTATGATCTCATTGACTTGTGGATTGTATAGCGACCACTCCCATCTGTTG CACAAAGACCATTATGGGGTCTAGAAAAATTCTTAAAATATGCCAGTGTTTCAAACCATTGAGAAATTAATTTGATGTGTGCCTTTTTCCCTTGGTCAAT CCTTTTCTCACTCATTTCTTCTGGATCTCACCTTTTGTGTTTACATTGTTTTTATTTTAAAAATTAGCAGAGGTAAGAAGTATTTTGACCTTTTACATTT CTATTCTGAGTGTGGAGATCCTTGCAAGAGAAACTTAACGACATCATATCTACTTTATGATAGATGGACTCTGGCCTGATTATAACAATGGAACCTGGCC AGCGTGTTGCACTAAATCTTCTTTCGATCCAAATGCGATATCAACATTGACTGATGCTTTAGAGCAATATTGGCCATCATTAAGCTGTAGGGAAGCACCA TCATGCCATGGTGGGAAAGGTTCATTTTGGGGTCATGAGGGGCTACCACATCGGTTCGCATTTGCAGTGGGAGAAGCATGGGACATGCGCATCACCTGTG GTTAGCAACGAATATGATTATTTCCTGACAGCGCTGAACGTCTATTTCAAATATAATGTCACAAAAGTTTTAAATGAAGCTGGATATGTTCCATCTAACT CAGAAAAGTATCCCATCGGAGGCATTATTTCTGCCATTGAGAATGCTTTTCATGCATCTCCTCAAATTGTTTGCTCAAGAGGTGCTGTGGAGGAACTTCG TCTGTGCTTTTATAAGGACTTCACGCCACGAGATTGTGCTGTTGGACCTGACAATAAAATTGATATGGTCACTTCAAAAGGATCATGTCCCCAATATGTT AGCTTGCCGGAACTTGCATCATCAGGACGTGATGAACTTCAAAGTTGGGTGTCTGATGAAGCGGCTCTTTAAGGTTATGGTAGAGTGCTTCTATTTGTAG TTTTCTGTAACTTGAGAATGGACAGCCACATTCATTAATAGGTTTAGTTGTTGTACCATTTATCAATTTGGAGAGGAATGGATTTATTGAAGAGTTGGAC ATTTGGGTTGAGACCCATGCCAGCTATAAACCAAGTTCCAAAATTGAAGACATGGATAAATGTATTATTATGCATCTACTTCAATTTTTGAGCCTGCTTC CATGTTAATGGGGCTGGGACTTTATCTGTTTCTTGGTTATTGAAAGAATACAAGTTTAATAAAGCGTGTTGTTTTATCATAAGAAATTGAGGATAATATA TATTATCCTCATGTATTTTTTATTATACATCTCTGTTTCTTTAAAAGCATTTACGTTTTCCTTGTATCACAAATGATGTCAAGCACAAGTACATGATGAA CTACAAG
• Tissue: pods
• Gene name: LI_gene_169467;
• Additional information: details;

Expression of Ll_transcript_354139

FPKM

• PAB: 18
• PNAB: 15.1
• PS1: 5
• PS2: 5.5
• PS3: 7.7
• PW1: 11.7
• PW2: 11.7
• PW3: 6.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_354139

• Blastp: Ribonuclease 2 from Arabidopsis with 63.79% of identity
• Blastx: Ribonuclease 2 from Arabidopsis with 63.79% of identity
• Eggnog: ribonuclease T2 activity(ENOG4111M7G)
• Kegg: Link to kegg annotations (AT2G39780)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019460218.1)
• Pfam: Ribonuclease T2 family (PF00445.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;