Ll_transcript_352780

• Id Trinity: TRINITY_DN49461_c0_g1_i1
• Name Transcript: Ll_transcript_352780
• Sequence: AGTGCTAATAGTTTATTATGATCTCAACCAAGTCAAATCAAATCCTTTAGGAAACAACACAATCATACATGTCAATCCTCAACAGAGAGGAACAAAGGAA CATGGCAACCCTTAGCCATCCCTTCAGGATTTCCAATCTAAACCACAAGACACAACAAAATTCTAAAAAAACAACATTAAGAACCACAAGATTTGGATTC ATCACTGCAAAATCCTCCACCACCACCACTAGTGCCAAGCAACTCATAGAGACAGGTACCATAAGGACTATATGGCCAAAAGATGCATCCACAGCTATGA ACTCAGATGGGTTTATTCTCCTTGATGTTAGGCCAAGATGGGAGAGAGAGAAGGCACATGTAACTGGGTCACTGCATGTTCCAATGTTTGTGGAAGACAC TGATAATAGTCCTGTAACTCTGCTTAAGAAGTGGGTTCATTTTGGTTATATTGGCTTGTGGACTGGACAATACTTTACTACCTTAAACCCTGAGTTCCTT AGCCAAGTGGAAAGGGCCATTCCTGGTAAGGATACTAAGCTTTTAGTGGCATGTGGAGAAGGGCTGAGGTGAGTGAGGTTCTAGAAAAAATTTGTTTTGT TGTTTAGAATATGGTTATTTTGTTATATCAAATGTAGTACATAGCTTTGAGTTTGAGTAAAGTGATAATTTAGATTCTGTTGCTTGTACTTAATTGAAAT GAAATTTTCTCCGTTCTTAGTGACAAACAGATAAAAGGGTAAGTCTCGGCATAAAAGTTGTTGTTTAGTGACCACATCTCGGTCATTGATTCAAATCCTG AAAATAGTCTATCCTTCTGAGTCTCTACTAAGTGTGAGTCTTAAACATTGTCCTACCTCTTTTAGTGAGACTGTGTCATTTCAAGACACAGGTCTGGATG GATCTAGGAAAAATTTCAAGGACTTCATGACACATAAATAACATAATTTTGACAAGGAATTTTGATACAAATATAATACATATATGTAACTAATTTTACA AATTATATTGAAGATCTAAATTAGTCCTCTGAAGACAAGAAAAAGTTCAGTGCAGCTTACTTATTTAGCATTCTTGGTGTTTATCTTCATCATGCATCAA GTAACTTGAAAGTAGATTCAATTAACTTCATTTGGAGAGAAGCTAGTTGTTGTTCTTATTTGTTTTCTGTGTAAAACTAAGAATGTACAAGATTCAAAAA ATGGCACTCTAAAGTACTTAACTTTTTATAAACTCCAACTTTCTTTTTGTAATTAATCAATAAAAATCTTCAAAGAATTTGAAGCATTAGCAGTTTGTAT TGTGTATGTGAATTTTCCCAATTCCAGTATTAAACATAAAGCCATCTCAGATAGCAGAACACGTTGCTTATGGCATTAAAGCCTCTAATATTTGATGGTT TTGCTCTATGATTCAGGTCAATGACAGCAGCTTCAAAGTTGTACAATGGAGGTTACAGAAATCTTGGATGGTTAGCTGGAGGTTTTAATCGATCGAAGGA CGATGATTTCGTTGTTGTAGAAGGAAAAGAGAAGCTGCAGTATGCAACAGTTGGTGGAGCTTCTTACTACTTTCTTCAGTTGCTCATACTCCTACAAGCT GTGGGTAAATGATAGATTATCAGCATATATTTTGTCAATGCTTAAGCCTATGCAGCTTTTGAGCTTGTAAGCTTTTAAGGCCTTGTTGCAAAGTACATTT GCTGCAACCTCCATTCAAATCAAGACTTCAAATTTTGCAATTTTGTCAATATAGAAAGTCATATTTTAGCACTATTTTTAAAGGCTGAATCCAATTCACT TTGTTTACCAACAAAACGTTGGTCTAGTGGTGCAAGGCTCTGCTAGATCACCAAAAAAGACCAAATGGTAAAAAATTTGATTCCTGAGAACAATACTTGT TGGGAGGGGCAGTCAGCCTTGTGAACCCCACAAAACAAAAATGCATGCTAATAATGCTAGAGTCCCTCTTATGTATACCAAGCATTGAGAAAATGAAAGG CTAAAATGGTGG
• Tissue: pods
• Gene name: LI_gene_169542;
• Additional information: details;

Expression of Ll_transcript_352780

FPKM

• PAB: 0.3
• PNAB: 0.5
• PS1: 0.3
• PS2: 0.3
• PS3: 0.6
• PW1: 0.2
• PW2: 0.2
• PW3: 0.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_352780

• Blastp: Rhodanese-like domain-containing protein 10 from Arabidopsis with 62.07% of identity
• Blastx: Rhodanese-like domain-containing protein 10 from Arabidopsis with 63.64% of identity
• Eggnog: (Rhodanese)-like(ENOG4111PM4)
• Kegg: Link to kegg annotations (AT3G08920)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019462510.1)
• Pfam: Rhodanese-like domain (PF00581.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;