| Id Trinity | TRINITY_DN49463_c2_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_353672 |
| Sequence | CTCAACAATACTTCTTTGAGCATGCCCTCAATATAACCCATGTCTCCGAGACAAATCTTATCCTCAAGATTGAAAGCAGGAAAACAGCCTCAAATGTTGT CCTACATTCGCATGAAGCTTCTAATGAGCTTTGACCATCCCAATGGACTAAAATTTCTTCATTTGTATTCTTTCCACTAGGTATTAAATGATGGCAAATA ATCAGAAATGGTGTTGCACCAGTAGTGTCAATGATGTTTGCAACACGAAGATAACATATTTGCATATTTGATTGGCAAGGGCAAGGTTTCAATAGTGAGA CATGAAAGACCGGATGGATGTGAGTTGTGTCCAGTAGTTCAAGCTCATATGCAACAGTGTCGATGCGATGTAGGATGCAAAAAGGGTTGTAAAACCTTTT TGCCAAATTTTGTGAAGAGTGACGGTGCATGGAGATTTGTCGGTAAGGTTGGAGTTTGAGGTAAACCCATTGACCCTATGTACATTCCTTTTTCTTGTCA CTTGGAATTTGTCTGTTGAACCATGCATTGTCTAGCTCTTGCAAGGTTATGTTTTAACAACTTCAATGTGTCATTTCTTTTGGATAAGTTCTCATCTAGA GAGGCAATTTTAGTGGAAGCCATAACATAAGATATTAGTGATGGTAGGGCACGATCATAATGAGCTTAAAATGGAGTCATCACAGTGACTGAGTGATGAG AAGTTTTATACCAAAATTCAGCAAGTGGATGGTAGATATGTTTCCAAGCAACGATTAAGGACTTCAGTCTGACCATCAGATTGAGGATGATAAGAATTGC TTACTGCCAATATAGTACCGAGAGATTTAAACAATTCTTGGCTAAATTTACTAATGAATATTTTATCCTTATCACTAACCATTGTTTTTGGAGTTCCATA GAGATAGGGAATTTCAGAAAGGAACACAGTGGCAAGATATACTGCTAGAAAATGTGTTAGCAAAGCAATAAAATGAGCATACTTGGTTAGGCAATCAACC ACTACCCAAATGACTGTTTTGTTTGAAGAAGGTGGTAAATTTGTGATGAAGTCCATCGATATAGCCTCCTAAACTTGTTGGGGAATTGGAAGTGGTTGTA GAAGGCCATAAGAAGCTTGAATATTATCGTTGTTGTATTAGTAAGTAGAACACGTGTTGATGAAAATTTTCACATATGCATACATTCCATGCCAAAATAA TGAATGGTATTCTTCCAACAAAGAAGGAATGAGATCTGCATCACGAGGAGGCTTTGTCACACGTTTGGGTTTATTTGCAGCAAATGAAGACCCAATCTCA GCAATACTTCTTTGTGCAGTAGGCCCCTCCGTATCAATGTACTTGTACAAATGTTGTATCCAATTTACGAAAGAGATTGATAAGATCGAATCAAACCTAA AAAGACTTAATATTCAAATTCTTCTTCGAGATTTTGCATTACCTTACTATTTTCTTCTCTATTGTAGGTAAAACCCCATTATCTAACAATTTCTTCAAAG ATTGAGAGGGATATTTGTACTTCGTAGTATCCTGAGGAAATATTGTAGATTTAGATGGTGTGAAACAGAGATTCACTATCCCTTTTTCGGTTCTCTACAA AAATTGCTAGGAAAATTAACTTGTCTTAATGAACAAGTACAAGCAAGATTTGCACAATGACAAAATAAATGGAAAAGGAATAGATTTCGATGTAAATATT GCCATCCTACTTCTATAAAGATGATTAGATTTTAGATGCATTTGTGGCTTGTGATTGAAGCTACAAAATTTGATGAGTACTCAAATGTATTATTGGCCAT AAAAATTAGTGGCAACAAAATTCCAGTATATGCTTTGCCTTTTATGCAAAGAATCTACTTTGCCC BLAST |
| Tissue | pods |
| Gene name | LI_gene_169573; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_353672
| Blastp | Transposon Ty3-I Gag-Pol polyprotein from Saccharomyces with 42.48% of identity |
|---|---|
| Blastx | Transposon Tf2-11 polyprotein from Schizosaccharomyces with 29.23% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (YIL082W-A) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019450597.1) |
| Pfam | Integrase core domain (PF00665.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |