Ll_transcript_405323

• Id Trinity: TRINITY_DN49501_c0_g1_i11
• Name Transcript: Ll_transcript_405323
• Sequence: AGCTAACCCATATAGTTATTTATATGTCCATGTTCATCCACTTTTTCTCCATCCCCTCTTTCACTCTTCACCCATCATCAACACTTTCTCTCTTCAACCC AACCAAAAACATGGCTTCAACTAGATCAAAGACCTTCACCATGATCCTCATCATGCTCACACTCTTAACCCTTTCATCAGCCATAGACATGTCCATAATC TCTTACGACAAAACCCACATGAACAAAAACAACGACGAACTCATGACCCTATATGAAGAGTGGTTAATAAAACATGGTAAGCAATATAACGCACTGGGTG AGAAGGAAACCCGGTTCGAGATATTTAAAGAGAATCTCCGGTTCATTAACGAACATAATAACGGTCTGAACCGGACCTATAAGCTTGGGTTGAACCGGTT CGCTGATCTGAGTAACGAAGAGTATAGGGCTAAGTTTCTTGGAACTAGGCTTGATCCTAAGAGGAGGATGGTTAAGTTGAGGACAAGGAGCAATCGTTAT GCGCCACGTGTCGGTGATGAGTTACCGGAGTTTGTTGATTGGAGGAAAGAAGGTGCTGTTGTTGGAGTCAAAGATCAAGGAAGCTGTGGGAGCTGTTGGG CATTCTCAACAATCGCTGCGGTGGAAGGAATTAACAAGATTGTGACAGGTGATCTGATTTCGCTTTCAGAACAAGAACTGGTTGATTGTGATAGATCATA CAATGAAGGATGCAATGGCGGACTTATGGATTACGGGTTCGAGTTCATCATCAACAATGGTGGCATTGACTCTGACGAGGATTATCCCTACAAAGCAGTT GATGGTACTTGTGACCAATACAGGAAAACTGCTAAAGTTGTTACAATTGATGACTATGAAGATGTTCCTTCATATGATGAGAAAGCCTTACAAAAAGCTG TTGCAAATCAGCCTGTGGCTGTTGCTATTGAAGGAGGTGGCAGGGAATTCCAGTTATATGATTCTGGTGTATTTACTGGGAGATGTGGAACTGCATTGGA CCATGGCGTTAATGCTGTAGGTTATGGTACAGAAAATGGTAAAGATTATTGGATTGTGAGGAATTCATGGGGTCCTAACTGGGGAGAAGATGGCTACATA AGACTTGAGCGCAATCTCGCAAGTAGCAGATCCGGCAAGTGTGGAATTGCAATTGAGCCATCTTATCCGGTTAAGGCTGGACAAAATCCCCCTAAACCTG GACCATCACCCCCTACACCTGTGAAACCACCATCTGTCTGTGACAATTACTATACTTGCCCTGAGAGCACTACTTGTTGCTGTATCTATGTGTATGCAAA TACTTGCTTCGAATGGGGATGCTGTCCTCTTGAGGGTGCTACCTGCTGTGAAGACCATTACAGTTGCTGTCCACATGAATATCCTATCTGCAACATTTAC GCCGGAACCTGTCTAAGGAGCATGAACAACCCATTTGGAGTGAAGGCATTGAAGCGAACTCCAGCATTGCGCCGCAATTCAGCTGGAGATGAGAACAAGA TAACCAGTGCTTAATCTTTTATAAGCCAGAATGTGTATGTGCAGAAGGAGAGGGTGATGAAACTCAATGGAGAAAGAAGGACTAAAATGCTAGTTGATTA TTTTTTTCCTTTTGTTTTCATTCATCCGTTGTGTTAGAAATTGATACATGCTGTGTCAAGTTTCTGTCATACATTGGCTTTGTACATAGGGTTATTTTAT GTGCTGTATTTGTATTCACATTTCAAACAAGGAACTTATTTGATTTTTATAAGTTTCAAACTTATGCAATTATGTGATCAAGCAAATCTGAATTCTTTAT TCAGATGCAGCTGTATTTCCTTAAAAAATTGAGTAACCACTTCAGATGAATCTATTGTACTTTTAATCGTCTGTTTATATTTCTTGTTAGTTAATAATAA TATAATGAATTATAGATGATGGATAATTA
• Tissue: pods
• Gene name: LI_gene_169877;
• Additional information: details;

Expression of Ll_transcript_405323

FPKM

• PAB: 94
• PNAB: 44.5
• PS1: 43.6
• PS2: 17.5
• PS3: 34
• PW1: 58.7
• PW2: 83.2
• PW3: 81.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_405323

• Blastp: Cysteine proteinase RD21A from Arabidopsis with 69.53% of identity
• Blastx: Cysteine proteinase RD21A from Arabidopsis with 69.64% of identity
• Eggnog: cathepsin(COG4870)
• Kegg: Link to kegg annotations (AT1G47128)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019429831.1)
• Pfam: Cathepsin propeptide inhibitor domain (I29) (PF08246.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;