Ll_transcript_406643

• Id Trinity: TRINITY_DN49569_c1_g4_i1
• Name Transcript: Ll_transcript_406643
• Sequence: AAAAAAGACACTACTTTTATTATGAGTATACATTGTCATTTTATATGTTTTCAAATAGCATGCTTTTGATACATTACTATGTTGACTACTCCCAACTCCC AACTCCCAACTCCATCTCTCTCTTCTGCTCAAGTTTGGACAGGACACATTTTCTTTTACTTTCTGTCTCTCTGTCTCTTTCTAACCGAATCTTATTAGCT ACATACATACACAAACAGATACAGATACACCCACAACACATTCCTTTCCTCTCTCAGGATTACTTCCATATAACTCTATTACTATACCACTCAGTTTTCA GCTTCACTACTTCATCTACACCTATCATATATTCAACCAGTAATTAGCATCAATTTAATAATATCTTACCAGGATTTGGCATAGAACAAATAAAAATGAA GTTCATGAAACTTGGGACAAGGCCAGACACTTTCTACACTGAACAAGCTACCAGACCTTCTGATAAAAATCAATGATGTGACCTATATGCTACACAAGCT GCAGTTTTTACTTCTTCCCAAATGTAGCCTCCTACAAAGGCTTTGCCATGATTCCAGCGATTCTGAATGTGTTGCCCTAGACCTTCATGATATACCTGGA GGGGGGGATGCTTTTGAACTCTGTGCCAAGTTTTGCTATGGAATTTCAATCAACATCAGTTCCCATAACTATGTACTTGCACTCTGTGCTGCCAAGTTCC TTAGAATGAAGGACTCCATTGAGAAGGGAAACTTTGTAGGAAAACTTGAGTCTTTCTTCAGTTCATGCATTCTTGAAGGTTGGAAGGATTCCATGGCTAC ACTTCAGACTACTGCTACGTTACCAGAGTGGTCTGAGAATCTTGGTATAGTCAGAAAGTGCATTGATTCAATCATTGAAAAAATTCTCACACCCCCACCC CAGGTCAAATGGTCCTACACCTACACTAGGCCTGGTTATACAAAAAAACAGCACCATTCTGTCCCAAGGGATTGGTGGACTGAGGATGTTTCTGATCTTG ACATAGATCTTTTCAGGTGCATAATAATGGCAATTCGATCAACATATGTTCTCCCCCCACAGCTTATTGGTGAAGCTTTGCATGTCTATGCGTGTCGGTG GCTACCTGGCATCACAAAGCTTAAAAGTTCAAGCAGTTCAGCGTCATCTCAAAGGGATGAATCTAAGGTGAGAAACCAAAAAATTCTTGAAACAGTTGTA AGCATGATTCCTGCAGATAGAGGGTCAGTTTCCATCGGCTTCTTGTTTAGACTTCTTAGCATTTCAATTCATCTTGGTGCATCCTCGGTGACAAAAACGG AACTGATACGTAGAGCCAGCCTACAGTTTGAAGAGGCAACAGTGAGTGACCTGCTCTATCCTTCCACATCCTCTTCAGACCAGAATTACTATGATATTGA GTTGGTGCAAGCAGTGTTGGAAACTTTCTTGAAGGTTTGGAAAAGAATGTCACCAGGTGTTGTGGATAACAGCTATTTTTTAAGATCAGTTAGAAATGTT GGGAAGCTCATTGATTCCTATCTTCAAGTGGTGGCAAGGGATGATAATATGGCAGTTTCAAAGTTTGTATCTCTTGCCGAAACCGTGCCTGGTATTGCTC GACTAGAACACGATGAACTTTACCATGCAATAAGCATCTATCTTAAGATGCATCCTGAGCTGAGGAAGGAAGAGAAGAAGAGGGTATGTGGAATTCTAGA GTGTCAAAAACTGTCACAGGAAGTGCGTGGGCATGCGGTAAAAAACGAGCTTCTGCCATTAAGAACAGTAGTGCAGCTCCTGTACTTTGAACAAGAAATG AAAGGGTCAAGGGAAAGCAGGAGAAGTGAAAAACCACATGAGATAGTTGTAAGAGATAGTAAGGAAGATAAAGAAGAAATGAATAACCAAAAAAGTAAAA GAAGATCAGATGGTAATAATAAGTTGGCAGAGAGAAGAGGAGACATTGTTGAGGAGACACAATCAGATGCCAAATTGGAATTTCATCCTAAAAAACTAAA TCAGATCATTCCCATCAAAAAACCAGATAGATAAATCAATGCTATGTGCTTTGCATGCATGCATGCAATTTGTAACTTCATTTCTTATTGTTAATTAACT TATTTCTAACCGTAAGTGTATAAATCCTGTGTACTACTATAAATTTCATGTAGAGTACTCGTATTATTTATTTATATTAATTCCAATTTAACCAACG
• Tissue: pods
• Gene name: LI_gene_170435;
• Additional information: details;

Expression of Ll_transcript_406643

FPKM

• PAB: 0.1
• PNAB: 0.5
• PS1: 0
• PS2: 0.2
• PS3: 0.6
• PW1: 0
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_406643

• Blastp: BTB/POZ domain-containing protein At5g47800 from Arabidopsis with 62.83% of identity
• Blastx: BTB/POZ domain-containing protein At5g47800 from Arabidopsis with 62.05% of identity
• Eggnog: BTB POZ domain-containing protein(ENOG410YFNP)
• Kegg: Link to kegg annotations (AT5G47800)
• CantataDB: Link to cantataDB annotations (CNT0000008)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019464801.1)
• Pfam: NPH3 family (PF03000.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;