Ll_transcript_407765

• Id Trinity: TRINITY_DN49587_c0_g1_i22
• Name Transcript: Ll_transcript_407765
• Sequence: CTAGTGTCGAAAACCCAACGACAATGTTTCTATTTATAATCCCCTTTTCCTTCACTACAAGTTGTGTAAAATCGAGTTAGGGTTTCATTTCTTCTTCACC GCACTGCGTTAACCCATTTCTCTCTCACCTTAACCACTCTTCTCGTCTTTACTCGTTTCCCGCCATCTAACCACTGCTATTTTGAATATTAGCCGTTAGA TCTGCCATTTTTGTAGTATCAGTGAAAATGTCTTCTTCTTCTTCTTCAGCGCTTAAGGAAGAGAAGGAAGATGAAGCGGTTAAAGGGGGAGAGCTAGTGT TCTGTGGTGCCACGTGTTGGGATATGATTGGTCGTAAAAAAGGCATCGAAGGTAACTTGGTCTCCCCCACGCGCCTCCGTCCTCTCATCGGCGTCGATAT TCGCTACGTCGTCTCCGGTTGCGCATCGTGTCATTGCGTTGCATTGGATGTTGAAGGGCGTTGCTATACATGGGGCCGTAACGATAAGGGGCAACTGGGT CATGGAGATACCATTCAGCGCGATAGGCCAACTGTGGTGTCTGGACTTTCTAAATACAAGATTCTCAAAGCTGGATCAGGGAGGAGTCATACAGTAGTTG TTACAGATGATGGAAATTCCCTAGCCTTTGGATGGAACAAGCATGGACAGCTCGGTGTAGGCTCTGTGCGAAATGAAATTGAATCATCTCCTGTTCGCTG TCTTGTGTCTGAAGTAACATATACTACTTGTGGTGGTGACTTCACCGTGTGGTTATCTTCTGTTGAAGGATCTTCTATACTGACTGCTGGGCTTCCACAG TATGGACAGCTTGGACATGGAACAGATAATGAGTATAATTCTAAAGACGGTTCTGTAAAGTTGGTTTATGAAGCCCAGCCACGTCCTCGGGCAATTGCAT CTCTTGCTGCTGAAACTATTGTCAAAGTGGCATGTGGAACAAATCACACAGTGGCGGTGGATAAGAATGGCTGTGTCTACACGTGGGGTTTCGGTGGTTA TGGAAGACTAGGGCATAGGGAGCAGAAGGACGAGTGGGCCCCTCGCCGTGTTGATGTCTTCCAGAATAGAAATGTTTTGCCTCCTGATGCAATTATTTCA GCTGGTTCTGTGAATTCTGCATGTACTGCTGGTATACCTCACATCTGGTCTTTTGTTCAATGACTACTTTTTGTTGATACAATTAATCTCGTTCATGGTT GTTGTTTCTGTTACTTTCTGGTAATGTATCTGTTATGAACTGATGCTATTGGTAGAATTATGGTTTCTTATCTAAGTTTCTAGCCTCTAAGCCTCTTGAA GAATTTGATGCTCGATCGACCTTGAAGATTCGAACAATTTGAGTACAGTAAGATGATTTGTGAAAGTTCTTTTTTTTGGATAAATAAAGAATTTCTTTAG ATGAGAAAAAGAGAATTTATGAAAGTAGAATTACCAAGTTCCTCTGATTTACGTTTATCATGGTCCATGGATGTACTGCATCCTTAATTGTACATGTTAT GTTCCCAATGTCCCGCAGATACATGAGCAAAACAGCATGGAGAAAAATATGAAAACACAACATTTTTCTTGAGTTGATACATATTGGTTATAATTTGTTG AGTGGTTATTTGTACATTGAAAAAGAATCCAAGCTGGAGAAAGTTTGAAGCCTGTTGCCAAACCTCCCTACCTTGTGTTACCCATATATCTGGACATCAG CAAGTCACGTTTTAACTTTGCCAATGGCCTAACGAATTTTCACTACTGATTACTTTTATCAGGTCTAAAAAAATTAATCGGTTTACCGAACCGTAATTTG CCATTTTATCAGTTGAAGTAGCACAACACCCTTATTAATGTCACTGGAGCTAAGATATTATAATTTGTCTGAGTTAGGAAATCCCTATCTGGTGTATTTT AATTTGTTTGGATATTGTCCAAAGAATAGCAATTGGTTTCAGTGCTAGTTTATTTGCATTTCAGCTGGAGGGCAGTTGTATATGTGGGGCAAATTAAAGA ACAATGGTGATGACTGGATGTATCCTAAGCCCCTAATGGATTTAAGTGGCTGGAACTTACGATGCATGGATTCAGGCGGTATGCACCATTTTGTTGGGGC TGATTCCTCATGCATAAGCTGGGGCCAAGCTCAGAATGGAGAGCTGGGATATGGACCTATGGGACAAAAGTCATCAGCTCTACCTAAAAAAGTGGATATA CTTGAGGGCATGCATGTTATGAGTGTTGCTTGTGGTATGGCCCACTCCATGGTTATTGTGGACAGAACAAATGTTGCTGAACGACTTGACCAGCTTGATG TATATGATGGAAAAGCTTTTGGTGAAGGGAATGCACCTGCAACCGAAACTCCAGTGCCTAAACAGACTGCAAAAAAGGGTGCAAAAGAAGCCAACAATTC AAAGAAGAGGAGAAAGGCAAAAGATTCATCGGAAGAGGATGAGGAAGAGGATGAAGATGTCGAAGAGAGTGACAATAGTGATGAGGATCAAGCCAATGGC GAGGCTAAGGTAAAAAGGGCAGGTAGAGGCCGAGGTAAGGCATCAACATCCAAAAAGTCAGGTACCGACGGAAAAGGTTCTGGCCGTGGGCGTGGTCGCC CTCCAGTAAGAAATAAGAGCAGTTCTAAGTCATCTCCAGTGAAATCAACTGGCAAGAGAGGAAGACCTCGCAAGTCGTCATGACATGGTTTGTTGTTGGA AACTTTGTTCTCTATACCTATAGAGATTGTAACATTTTTAATCCATTGGCCGGTGATGTTAACTAGTATTTTAGTGTTATTAAAAATCTTCTCCCTCAAT TTAATGCATTTTTTTGGATAACATGTTTTGTGTAACTGTGTAAGGGAAAACTTCCATTGCCTCACTCTTTGGATATGCCTCTAAAAGATCTTACTAATGT ACTGAACTGTTGACTCAATATTTGTTGAAGCTGGAGGATGATTAAATTTATTATTTTAATCTAAAAA
• Tissue: pods
• Gene name: LI_gene_170605;
• Additional information: details;

Expression of Ll_transcript_407765

FPKM

• PAB: 1.1
• PNAB: 4.7
• PS1: 4
• PS2: 1.5
• PS3: 2.4
• PW1: 3
• PW2: 1.8
• PW3: 1.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_407765

• Blastp: Protein RCC2 from Mus with 39.64% of identity
• Blastx: Protein RCC2 from Homo with 39.15% of identity
• Eggnog: regulator of chromosome condensation(COG5184)
• Kegg: Link to kegg annotations (108911)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019415445.1)
• Pfam: Regulator of chromosome condensation (RCC1) repeat (PF00415.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;