Ll_transcript_407993

• Id Trinity: TRINITY_DN49590_c0_g2_i2
• Name Transcript: Ll_transcript_407993
• Sequence: TACACCCAAGTACTCTAAGGCTAGGTATGATGAAATCGTGAAGGAAGTTTCTTCTTATCTGAAGAAGGTTGGTTACAACCCAGACAAAATTCCATTTGTT CCCATCTCCGGTTTCGAGGGGGACAACATGATTGAGAGGTCCACCAACCTTGATTGGTACAAGGGCCCAACTCTTCTTGATGCTCTTGACCAGATCAATG AGCCCAAGAGACCCTCCGACAAGCCA
• Tissue: pods
• Gene name: LI_gene_170622;
• Additional information: -

Expression of Ll_transcript_407993

FPKM

• PAB: 22.1
• PNAB: 100.8
• PS1: 85.8
• PS2: 61.5
• PS3: 56.7
• PW1: 72.6
• PW2: 108.4
• PW3: 79.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_407993

• Blastp: -
• Blastx: Elongation factor 1-alpha from Lycopersicon with 98.67% of identity
• Eggnog: This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (By similarity)(COG5256)
• Kegg: Link to kegg annotations (101244084)
• CantataDB: Link to cantataDB annotations (CNT0000351)
• Mirbase: egu-MIR172d (MI0020570)
• Ncbi protein: Link to NCBI protein (XP_019427228.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;