Ll_transcript_416130

• Id Trinity: TRINITY_DN49609_c1_g1_i8
• Name Transcript: Ll_transcript_416130
• Sequence: ATAAACTATACATAAGATACATCCACACTCACTCAGTGAAACCCTAACAATGTCGACATTGGATACTATCTCAGAGGCACTGAACCTCATCGATTCGAAG AAACAGAATCTGAAGAAAGCATTCGACGATCTTCAATCCCAATCTTCTGTCGTCTCCAATTCTCTCCCTTTCTCCTGGCCCCACCTCGATTCCCACTTCT CTTCCATTCAATTCTCCCTCTCACAACGTTTCCATCTTCTCCAAACCCTAGATTCTAATCTTAACCCTCCTCAACCGTCACCGTCAAATTCACACCACCA AGCCCCCAGAGACGCCAACTTCACGCCGTTACCTAACGACCTATCTACACAGAACGACGGTTCAAGCGGCGTGTTCCCAAAAAACTACGTCGTTCCGAGT TCCGTTGTTCCTAGGTATGAGTTGAGTGTCCTGTGCGAGAAGATGGAAGGGAAAGGGTTGATAGATTACCTTATTGCCCACATCAGGGATAGGGTTGTGA TCGAGGCAGAGCTTACAGGGGCGTTGCGTTGTGCGCCAAATGCGGCCGAGATGGTTGTGGAATCATTTGAAGGGTATAATGAATGGGATAAAGATTGGAA AGATAGGGAAATGAAGTTGCTGAAGGGAAAGGGATGGAAATCGTGGAAGAGGAGTTGTATCATGCTGTTGAAACAGCTGAGGGTTGCAGCACCAATTGTT AGTTCGAAGACAAGGGAAAGAGCGTTGAAGGTGGCTAAGGAGTGGAAAGAGAGGATTGAGGTTAATCATAAGAATACTTTGGGAGTATTGGGATTTTTTC ACTTCGTGGCAGCGTATGGGTTGGTTTCTGATTTCAGTATGGATGAGCTTGTAGATTTTTCGACAAAGTATGGAGGAGTTGCTGAAAATGATGAATTTCC TGAGTTATGCAGGACCACTGGTTTGGCAGATAGAGTTCCTGATATTGTTCAGAAACTTATACAGAGGGGAAAACATATTCTGGCTGTAAAGTATGTATAC GCGTTTAATCTTGTTGATAAGATCCCACCAGTTTCCATTTTGAAAGCTTGTTTGCATGAGTCTAAGGAACTTTCTAAAAGACTTTCTGAGGAAGGAAAGC CACTGATGGAGATTACAGCTAGAGAAACTCATACACTGAAATCAGCAATTAAAATTATTGAGAATCACAAACTTGAATCTGAATATCCACCAGCTAACCT GGAGCAGCGCATAGTGGAATTGAGGAGGCAAAAGAAGTCATTTATGAATAGTCGTTTAGCAGCTTCTGCCACAAGGACCCCTCAACAGCTACAGCCACAG CCACAGCCACAGCCACAGCCACAGCCACAGCCACAGCAACGGCCACAGCCACAGCCACAGCCACAGCCACAGCCACAGCCACAGCCACAGCCACAGCAAC TCTCAAAGAGAAAGATGCGGAAGCTTAAGAAGCAACAAGGTGGGACCCAGCGTCCTGGAACATCTGCTCCAGTTGGTCCTGAAGCTGCACTGAAGAATGT CAATATTGGCAATTCAACGATGCACCAGTACCAGCAACATCATTTACATTCGTCAGGTGTATTTTCTGAACATCCAAATCCATACATGAGCTCACCAGCC ATGCCATTTGGCATGGTGGCCCCCGCTCCAGCTATCTCTCTTTACGCCGGTCCTTCGGCTGGACCCTATGGTCTTGCTGGTGTCCCGATGAATCCAAGTG CCAACCCCAGTCTAGGTGGTTCTCATCCAAACTCATCAAAGCTGCATGTGCCATCTGATTATTATGGTGGTTTTGGTCTGCAACATTATTACAAAGGATC TTATTAGCCTCAAATAGTTCAATGAATTGCTTATCAATACTGAACTTTTGGCTGGTATTATATTTCCTCCCTGACTTTGCACCTTGGCTTTTGGCTGGCA TAGTTTGCTACTTTTATTCATTGGTCACCATGATTATAGGATAGGAACTAGATTCAGTAATTATGAATTTTTGTAGATATTCGTTTAAATTGTGCAAAAT AATTGTTTTCATATAGTAACTTATAAAAAATATATGAATTTATTTGAATATAGATTAAAAAA
• Tissue: pods
• Gene name: LI_gene_170769;
• Additional information: details;

Expression of Ll_transcript_416130

FPKM

• PAB: 9
• PNAB: 5.7
• PS1: 6.3
• PS2: 4.5
• PS3: 6.5
• PW1: 6.6
• PW2: 5.5
• PW3: 4.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_416130

• Blastp: FRIGIDA-like protein 2 from Arabidopsis with 31.28% of identity
• Blastx: FRIGIDA-like protein 1 from Arabidopsis with 31.75% of identity
• Eggnog: FRIGIDA like(ENOG410YI1U)
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_020232767.1)
• Pfam: Frigida-like protein (PF07899.10)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;