| Id Trinity | TRINITY_DN49616_c3_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_415822 |
| Sequence | GAAAAAACATAGAAGGTTTTGTTTAGGATATAATGGCCCTTATTGTGGTTCTAGTTTGGCTTATTGATTACAAAATCTCCTTGTTTCTAGGCTCCTCAGA TGCAACAAGTAGTGTCGCTGCCCTGGGATCGGATGGGTAAAGTATTGGAGGGTGCTTCACATACTCTAGTGTAGACAGGGTTCCTTGCTCTCTTATACTT TTCTTCTTCTTCTTCTTCTCAATAGAGAATAGTGGGAGCAGAAATGGATCTTCTGTTGAGCGCATACTCCAATAACTCTGACTCTGACGATGAGGAAGAA CAACAACAACAAAAACAACCCGAACCCAAAAAACAGAGATTTTCAATCCCTTCCTCCGAATCTCAAAAACCTAATCTCACTCTTCCTTCAACCCCTTCTC TTCCCACTCCCATCCCTGGAAGATACGTTTCCAAGCGTCAACGACAGCGTTTCGATCCTCTCTCCACTCTTCCCTCCCCACTCCACCCTCCATCTCCATT CACTCTAACCGGAAGTATCTTGGATGCTGATTTACCTCGTAGTATTATGCCATTGTTGAAAAGTAAAGCAAAGGGGCATCAAAACCTGAGCTCAATTCCG GAGAAGCTATCTGTGGCTCTATATGGCCATACAAAACCTGTTAATGCCATACATTGGTCATCAACTCATGCTCATCTCCTTGCATCTGCCGGAATGGATC ATACGGTTTGTGTATGGAATATATGGAGCAGAGGTCAGAAGAAAGCATGTGTGTTGAACTTTCACGATTCAGCTGTGAAAGACGTGAAATGGTCCCAGCA AGGGCCCTTTCTGCTTTCTTGTGGATATGATTGCACATCAAGGTTGGTTGATGTTGAAAAGGGATTGGAGACTCAGGTTTTCAGAGAAGATCAAGTTGTT GGAGCTATAAAGTTCAGTCCAGACAATTCAAATCTCTTCATTTCCGGGGGATCAAAGGGTAATATCAAACTATGGGATATCAGAACCGGCAAAGTAGTGC ATAACTATAATCGAAATTTAGGTCCAGTTCTGGATGTTGAGTTTACAATGAATGGGAAGCAATTCATTTCTTCTAGTGATGTATCTGGGAGCAATGTCAG TGAGAACTCTATTATTGTTTGGGATGTGTCAAGACAGGTTCCACTATCTAATCAGGTCAGAGAATTTTTTATTATTATGGTTCAGTCCTTTTCTGCCAAG TTTCGGTGAAATTTTGTTATCTTTAGTTTAAGAAGCATTGCTGATGTTTGCTACAACTCTTTTGGAACAATAAAGTCATTCTAGAGGGACTAGAATTGAT ACAAATAGCCTAGTAAAAAGCCCTAGTTTACAAGTTCTATCTCTGTCGAAGGGAGTTGATGGAAATCATATGATAATATTCAGTAATTGATAGTAGTAAC AGCCTGTCAAATAGTAATTTATTTTATAAAATATTGTCGAAAAGGTATTTTGGGATTTCTTAGGAGTCTTGATTTTATGTGACAAGCCATTCAAAGATCT CCAATATGAATAGGAGAATACAGTAAATACCCTAATAATAGTATCAACATCTGAGGAGGTCTAGAGTGCTTTGAAAGTATGTCTTCATGATAAAAATATA AACCTCCTTTTGCTGATCTCTCCATTGAAATAACACTTGAACTTCAACATGGAAACACACTGAAGTCTGGTCACTGAAGTTCCTGTATGAAATTCATGTT TATCTTTTGCTACTTAATAAGGATAACTGTGTTAGGACAGAAGGGTAAAAGGTTATTTGCTTTGAAGAATAAAGGTTTTTAGAGCAATTAATTTAGTTGT ACTGTTATAGCGGATAAACAACAACCAAGCCTTAGTCCCACTAGGTGGGATCGGCTTAGTTAGAATGGATCTTGTAGATAACTAGTGGGAATATGGGGTA GAAGGGGATCATTCTGATTTGTTAACCTTGTGAGAAACAAGCATTGCCAGTTGCATAATGGTAAACCTTTGGAGGAGAATTGTTTCTCCTATTTTATTCT GATTCTGTTTTGCTCATCAATAAAATTGTCCATTTGCATTTCTCTTTTCCCATCAATTTCACAGCTTTTTGATTTGGGCTCCTAGCAAATTGTATTCAGG GTTTTGGTGGGTATTCAAGGTTATTTGCTTCTGTGTTCTCTTTCTTCTTACCCTCCCCTTTTATTATTCGCTCCAGAAAGTAATTTTTAGAAAGACATTC GTTGCGAGTTTTAATGGAGGACTTCAAAATATTCTGTTTGACATAAAGGCGTTGAGAACTCATAACCAACACACTTCTACATTCAAATCAGCCAGGAAAC CTGCTAGTTTTTCTGCTTAGAAAGTTTTAGACTCCGATTACACTCTAAATGATGTGTCCTTTTATTTATCATGTACACACATCTGAAATACTTGAGCTAA AAACGCATCTCAAGTTACATAGTTTACATTGTTAAAACTGAAATGCCCATGTTTAATATTGCAGGCAATTTCATGTTTTACATTCTCATTGCCGAAGTAT CAGGTTAATTTACTGTTCAATTGGAGGGTTTTTAGGTAAGGGAGGAAGGAAATAGAGAATGGAGATGCAAAATAATATAAATTTGAACTTGATAATGGTT TGATGAATAATGTGATGCAAAAGACAAACATAACAGTCATATATATACTAATAATAGACTCTTGGTCCTAAAAAAAGGAGTTCGGTGCATGAGGCTCCCA CTTAGTAGTATCTGGAGATAGTAGATGTACTCGGCCTAACGCCACAAGCGAAGAGACTGTTTTTAGGATTTGAACTCGTGACCTCATGGTCTGTAAGCAA AAACCTTACCGTTACTCâBLAST |
| Tissue | pods |
| Gene name | LI_gene_170812; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_415822
| Blastp | WD repeat-containing protein 25 from Homo with 33.33% of identity |
|---|---|
| Blastx | WD repeat-containing protein 25 from Mus with 37.91% of identity |
| Eggnog | WD repeat domain 25(ENOG410XQV4) |
| Kegg | Link to kegg annotations (79446) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019414087.1) |
| Pfam | WD domain, G-beta repeat (PF00400.31) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |