| Id Trinity | TRINITY_DN49616_c3_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_415823 |
| Sequence | GTATCTTGGATGCTGATTTACCTCGTAGTATTATGCCATTGTTGAAAAGTAAAGCAAAGGGGCATCAAAACCTGAGCTCAATTCCGGAGAAGCTATCTGT GGCTCTATATGGCCATACAAAACCTGTTAATGCCATACATTGGTCATCAACTCATGAGTTAGCTTACAGCTCATCTCCTTGCATCTGCCGGAATGGATCA TACGGTTTGTGTATGGAATATATGGAGCAGAGGTCAGAAGAAAGCATGTGTGTTGAACTTTCACGATTCAGCTGTGAAAGACGTGAAATGGTCCCAGCAA GGGCCCTTTCTGCTTTCTTGTGGATATGATTGCACATCAAGGTTGGTTGATGTTGAAAAGGGATTGGAGACTCAGGTTTTCAGAGAAGATCAAGTTGTTG GAGCTATAAAGTTCAGTCCAGACAATTCAAATCTCTTCATTTCCGGGGGATCAAAGGGTAATATCAAACTATGGGATATCAGAACCGGCAAAGTAGTGCA TAACTATAATCGAAATTTAGGTCCAGTTCTGGATGTTGAGTTTACAATGAATGGGAAGCAATTCATTTCTTCTAGTGATGTATCTGGGAGCAATGTCAGT GAGAACTCTATTATTGTTTGGGATGTGTCAAGACAGGTTCCACTATCTAATCAGGTCAGAGAATTTTTTATTATTATGGTTCAGTCCTTTTCTGCCAAGT TTCGGTGAAATTTTGTTATCTTTAGTTTAAGAAGCATTGCTGATGTTTGCTACAACTCTTTTGGAACAATAAAGTCATTCTAGAGGGACTAGAATTGATA CAAATAGCCTAGTAAAAAGCCCTAGTTTACAAGTTCTATCTCTGTCGAAGGGAGTTGATGGAAATCATATGATAATATTCAGTAATTGATAGTAGTAACA GCCTGTCAAATAGTAATTTATTTTATAAAATATTGTCGAAAAGGTATTTTGGGATTTCTTAGGAGTCTTGATTTTATGTGACAAGCCATTCAAAGATCTC CAATATGAATAGGAGAATACAGTAAATACCCTAATAATAGTATCAACATCTGAGGAGGTCTAGAGTGCTTTGAAAGTATGTCTTCATGATAAAAATATAA ACCTCCTTTTGCTGATCTCTCCATTGAAATAACACTTGAACTTCAACATGGAAACACACTGAAGTCTGGTCACTGAAGTTCCTGTATGAAATTCATGTTT ATCTTTTGCTACTTAATAAGGATAACTGTGTTAGGACAGAAGGGTAAAAGGTTATTTGCTTTGAAGAATAAAGGTTTTTAGAGCAATTAATTTAGTTGTA CTGTTATAGCGGATAAACAACAACCAAGCCTTAGTCCCACTAGGTGGGATCGGCTTAGTTAGAATGGATCTTGTAGATAACTAGTGGGAATATGGGGTAG AAGGGGATCATTCTGATTTGTTAACCTTGTGAGAAACAAGCATTGCCAGTTGCATAATGGTAAACCTTTGGAGGAGAATTGTTTCTCCTATTTTATTCTG ATTCTGTTTTGCTCATCAATAAAATTGTCCATTTGCATTTCTCTTTTCCCATCAATTTCACAGCTTTTTGATTTGGGCTCCTAGCAAATTGTATTCAGGG TTTTGGTGGGTATTCAAGGTTATTTGCTTCTGTGTTCTCTTTCTTCTTACCCTCCCCTTTTATTATTCGCTCCAGAAAGTAATTTTTAGAAAGACATTCG TTGCGAGTTTTAATGGAGGACTTCAAAATATTCTGTTTGACATAAAGGCGTTGAGAACTCATAACCAACACACTTCTACATTCAAATCAGCCAGGAAACC TGCTAGTTTTTCTGCTTAGAAAGTTTTAGACTCCGATTACACTCTAAATGATGTGTCCTTTTATTTATCATGTACACACATCTGAAATACTTGAGCTAAA AACGCATCTCAAGTTACATAGTTTACATTGTTAAAACTGAAATGCCCATGTTTAATATTGCAGGCAATTTCATGTTTTACATTCTCATTGCCGAAGTATC AGGTTAATTTACTGTTCAATTGGAGGGTTTTTAGGTAAGGGAGGAAGGAAATAGAGAATGGAGATGCAAAATAATATAAATTTGAACTTGATAATGGTTT GATGAATAATGTGATGCAAAAGACAAACATAACAGTCATATATATACTAATAATAGACTCTTGGTCCTAAAAAAAGGAGTTCGGTGCATGAGGCTCCCAC TTAGTAGTATCTGGAGATAGTAGATGTACTCGGCCTAACGCCACAAGCGAAGAGACTGTTTTTAGGATTTGAACTCGTGACCTCATGGTCTGTAAGCAAA AACCTTACCGTTACTCâBLAST |
| Tissue | pods |
| Gene name | LI_gene_170812; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_415823
| Blastp | WD repeat-containing protein 25 from Mus with 38.99% of identity |
|---|---|
| Blastx | WD repeat-containing protein 25 from Mus with 39.52% of identity |
| Eggnog | WD repeat domain 25(ENOG410XQV4) |
| Kegg | Link to kegg annotations (212198) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019414087.1) |
| Pfam | Eukaryotic translation initiation factor eIF2A (PF08662.10) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |