Ll_transcript_413987

• Id Trinity: TRINITY_DN49640_c0_g2_i2
• Name Transcript: Ll_transcript_413987
• Sequence: CTTCACATGGCAGTGAAGGGACAGAATCTTGTGGTGGTGGAGGAGTTGATAAAAGCAGATCCTTCATTAATAAACATTGTTGATACTAAGGGAAATGCAG CATTGCACATAGCAGCCAGGAAGGGTAGGAGTCAGGTAAATTAGACACTGCTTGCTTAGTCCACCGAAATTTTTACTCATAAAACTTCATATATTATGTT ACGATGATAAGTGATTCTGATTTAGTTCCCCTTCCATGTTCTGGATAAAGGTATATTTGCCTGTCTATCTCGGACAACTCTATTGTTGTCAGTTTTGATA GTATTCTATAGTAATTGGTGACTTTAATCAGGTTGAATAAGCTCTTCCATATCAAGCTAGTTAATATAGATGTATGTTTTGTTAACTAGAAATGTGAGCG AGTAATTATTAAGGTGAAAATAAAGTGACAGGCTGAACTTTTTATGATATTTGGCTAGTCTTTCGAAAACAAGCATCTTGAGTTGCACATTTAGTAGTGG TAATGAAGGTGTGAAAAGAATTCCATCTGCTTTCATTAGGATTGTGATATCCAATTTAGAGTTGTGGTTTTGACCTATTAACTAATCGGTCCCTAACTTT TGATGGTCCTTCAGATCATAAAATTTTGATTTATGTTCTTCATAGAACAAACCCAGTGCCAGTTTTTACATTATTTTAGAATTATATATTTTTTCCAGCT TCAGTAACCATACATGTGTATCAGGTCTACTACTTAATGAGAGTGACAAATCTTTCATTTAGCCGGGCAATGTTTTGATTCATGATAATAGTTAGTCTCT CCTATATGTCTGGTTAGGGGGAGGGTAAAATATCTTACATTTGTTTGTGCAGATTATAAAGTTTCTTCTTGGACTGAAAGAAACAGATTTAACCGCTGTT AATAGATCTGGTGAAACTGCGTTGGACACTGCTGTGGTAACCGGGAACCACGACGTTAAAGCCATTCTTCTAGAACATGGTGCTCAGAGTGCCAGAGCCC TAAAGCCTCAGGCCACCACGTCCGCAGCGCGAGAATTGAAGCAAACGGTGAGTGACATAAAGCACGAGGTCCATTACCAATTGGAACACACTCGCCAAAC CAGAAAACGTGTTCAAGGCATCGCAAACCGCATCAACAAGATGCATGCTGAAGGACTCAACAACGCAATCAACTCCACGACGGTGGTCGCAGTCCTTATC GCCACTGTAGCATTCGCTGCTATTTTCACAGTTCCAGGTCAATTTGTTGATGACCCAGATAACATTCCACCGGGAATGTCCCTTGGTGAAGCAAATATAG CGCCACAAGTTCCATTTATAATCTTCTTTGTCTTCGATTCCATTGCTCTATTCATCTCACTTGCGGTCGTGGTGGTGCAAACTTCTGTCGTGGTTATAGA AAGCAAAGCAAAGAAGCAAATGATGGCCATCATTAACAAGCTAATGTGGCTTGCATGTGTGCTTGTGTCAGTGGCATTCTTGGCACTATCATTTGTAGTT GTTGGAAAACAAGAGAAGTGGTTGGCAATAGGTGTGACAATTATAGGGACAACCATAATGGCTACAACATTGGGAACTATGTGTTATTGGGTCATTAGGC ATAGAATTGAGGCCTCAAATTTGAGGAACATTCGGAAATCTTCAATGGAAAGCAGATCAAAGTCTTTTTCAGTGTCTGCATTGTCAGATTCTGAGTTACT AAACAATGAGTTTAAGAAAATGTATGCCATTTAGAATTCATCAGCCTCTTTCACTCTCATTTTTCCTCTCCAATTTTTTACATTTGGTTCATGGAATTGT ATCTAATTAAAGATCAATGTTTTTCTTCATAATCCATTTTTTGGCTACTAGGGCATACCCTCACCTTCCGAATGCATAGCTGACCCTTCCGGCATGTGTC ACTCAAAAAATCGAACCATTGACATTTTGGTCATTCTGGAATCCAGCAGGACCTTGTACTACTAGATCAGTGTTTTGTTCGTTTCTTAGTAATTCATTAA ATCAATATAGAAGGATTCTAGAGTAGCC
• Tissue: pods
• Gene name: LI_gene_171031;
• Additional information: details;

Expression of Ll_transcript_413987

FPKM

• PAB: 0.2
• PNAB: 0.7
• PS1: 1.2
• PS2: 0.1
• PS3: 0.3
• PW1: 0.9
• PW2: 0.5
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_413987

• Blastp: Ankyrin repeat-containing protein At5g02620 from Arabidopsis with 66.16% of identity
• Blastx: Ankyrin repeat-containing protein At5g02620 from Arabidopsis with 58.77% of identity
• Eggnog: Ankyrin Repeat(COG0666)
• Kegg: Link to kegg annotations (AT5G02620)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019436236.1)
• Pfam: Domain of unknown function (PF13962.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;