| Id Trinity | TRINITY_DN49654_c3_g1_i12 |
|---|---|
| Name Transcript | Ll_transcript_415677 |
| Sequence | AGATATTATGTGCACACGTGTTTGCAAAATGTCAGAGGTTCAAATCCTAGAAATAGCCTCTCTGCTTGAGGAAGTAAGGCACATACATCTACCCTTCATA TACTCCACTAAGTGGGAGCCTCATGCAGTGGACCGTCCTTTTTAATATATTTGCATAATGCTGCCTTATTTACAAATTAAAACACTACTATTTGTTTTTT GACAGAAAAAAGGGTTGTTATGAAACAATAATCATGTGTGTGCAAAAATATGGCTTATCACTTATTTCATTTTGAAGAAGTTGAGCATTTCAGCAACGAT AACAGTGAGCATGGAAATGGTTTGGGCTGTAAGTTGTGGTTCTTTTTAGGTTTAAAAATAAGTTGTTGATCCATGTAACTGACGATTTTTGGGTTTAGCC ACGATATAAATTCTATTTGTTTTTAGGCCCCCATAATACAAAATAGTGCGGTACACTGTTGTTTTTGTATTTTTAGGGACTAAAAGCGAATAAAGTTCTA ATAGGGACTAAAGCAAAAAAACAACATATGAAAACATTTCTTTTGCTTACCATTACATTCCGTAAGTGTCACCATTATGATGGTGTAGCATTTCCATTAA GGATGATTTACTTTCTGTTTATATATTTAAGTCTGATCTCCCTCCGCTTCATTTTTAGTGAGGCTTTTTATGTCTTTTAATATTACTTTTTAATCAAGTA AATGCAATACTGCTTTTCGGCAAATCACTCTTGTCCTAACAACTATTGCCGTGATTCTAGATAAACCCTCAATTGTATGGAATGCATCATACTAGAATGC CTTTGCCACTTGAAATGGAGGAGGAGCCTGTTTATGTTAATGCAAAGCAGTATCATGGTATTTTGAGGCGAAGGCAGTCACGTGCTAAGGCTGAGGTCGA AAAGAAAGTGATTAAAGCTAGAAAGCCGTATCTGCATGAATCCCGTCACCTACATGCGCTGAGAAGGGCAAGGGGTAATGGAGGTCGCTTTCTCAATACA AAGAAGCTTAAAGGTAACAGTTCTGATGGCACCATAAGCAACAACAATGGTGCACAACCCTTAACATTATCTGGCAGCTCATCTGCAGCTCAACATTTGG TTACCAACAACGGAATTCTCGTCTCATCAAATGATCAGTATGGTGCATCACAGTCCATAGTTGAGGACATGCATCAGGTGCAGAGTTTCACCATTGGTTA CCATGATGGCAATGGTCTTTCATCACCATACTATTCACAGTTAAATGGAAAAAAAGATGGAGACTGCTTTGGTAGAGAGAGGGAAAGCGTGCGCATGCAT GGAGCCCCAAACGGGGCTGTAAAGTAACATTCCCTCGGAGTTGGTGGTTTTCTCTCTGGCATATATGGCAACAGTTAGGTACTTAATACTCTTGGTATAT ATTACTACCCATGTTCGAAAATAATCTAGTACCTTCGATTTTAGACAAATATAATCTGAGGTCACTAAATTACTCGCACTTGCAATGTACTCTCATTTCG CATAGTGGAGAAATCGAAAGATAAGGATAAAGATGCAAAAAAATAAAATATGTCTTGGCTTGCTAAAGCACAAATAAAATGAAACTTATGGAGTAATGGT TTGCAGGTGAAGATGAAGGTCTCTGTCTAATCCAAAAGTTGGAGGAAACCACCCTTGTGTTACAGTAATTCTCAGGCAATTCATTCTTGGCTCAGTTACT TAGATCAAAGTGGTGAGATCAGCAAGGAAGATTCATGGTACAATCCACTCCTTGTTTGGTCTCCCCTTGTTTCCTATTCTCTTCATAAGTCCACTTGTTA AATGGATTAGAGAGAAAGCAAAAATAACATTGGTTTGTGAACTTTTTAAGTTGATATAATGGTGAAAGTTAATGTGTGAAACTGGATTTGGAGGTTATTG AACTGTAAACAAATTTGTATGACACATACTGCACAATTGTGTAAACCTTCTTCCCTATTCTCTATTTGTCCTTAATTGTTGTGTGTAGGAGTTTTTCATG GATGTGTTTGTGCAACCATATGAAATTTGCTAGCCTATTATTGTTGTAGCTCTTGCATGCCCATAATCTTGATATTGTTGCATCCTATAAATGTGGCAAG TGTTGAAGTGAATGAATTTAAAGTTGGTGAATAAATCTGCC BLAST |
| Tissue | pods |
| Gene name | LI_gene_171138; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_415677
| Blastp | Nuclear transcription factor Y subunit A-8 from Arabidopsis with 72% of identity |
|---|---|
| Blastx | Nuclear transcription factor Y subunit A-4 from Arabidopsis with 67.47% of identity |
| Eggnog | Nuclear transcription factor Y(COG5224) |
| Kegg | Link to kegg annotations (AT1G17590) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019449593.1) |
| Pfam | CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B (PF02045.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |