Ll_transcript_415673

• Id Trinity: TRINITY_DN49654_c3_g1_i8
• Name Transcript: Ll_transcript_415673
• Sequence: AGATATTATGTGCACACGTGTTTGCAAAATGTCAGAGGTTCAAATCCTAGAAATAGCCTCTCTGCTTGAGGAAGTAAGGCACATACATCTACCCTTCATA TACTCCACTAAGTGGGAGCCTCATGCAGTGGACCGTCCTTTTTAATATATTTGCATAATGCTGCCTTATTTACAAATTAAAACACTACTATTTGTTTTTT GACAGAAAAAAGGGTTGTTATGAAACAATAATCATGTGTGTGCAAAAATATGGCTTATCACTTATTTCATTTTGAAGAAGTTGAGCATTTCAGCAACGAT AACAGTGAGCATGGAAATGGTTTGGGCTGTAAGTTGTGGTTCTTTTTAGGTTTAAAAATAAGTTGTTGATCCATGTAACTGACGATTTTTGGGTTTAGCC ACGATATAAATTCTATTTGTTTTTAGGCCCCCATAATACAAAATAGTGCGGTACACTGTTGTTTTTGTATTTTTAGGGACTAAAAGCGAATAAAGTTCTA ATAGGGACTAAAGCAAAAAAACAACATATGAAAACATTTCTTTTGCTTACCATTACATTCCGTAAGTGTCACCATTATGATGGTGTAGCATTTCCATTAA GGATGATTTACTTTCTGTTTATATATTTAAGTCTGATCTCCCTCCGCTTCATTTTTAGTGAGGCTTTTTATGTCTTTTAATATTACTTTTTAATCAAGTA AATGCAATACTGCTTTTCGGCAAATCACTCTTGTCCTAACAACTATTGCCGTGATTCTAGATAAACCCTCAATTGTATGGAATGCATCATACTAGAATGC CTTTGCCACTTGAAATGGAGGAGGAGCCTGTTTATGTTAATGCAAAGCAGTATCATGGTATTTTGAGGCGAAGGCAGTCACGTGCTAAGGCTGAGGTCGA AAAGAAAGTGATTAAAGCTAGAAAGGTATGGTTGATATCTAAATTAGTAGGAAGGGGCCACTGCTATGATTTTTTTTACAATGAAACAGAAATGAAGGAA AATAGCGGTAAAAACAAATTTTGTTTAAAGCAACAGGTTACTTTTTGCTGGATTAGTAGAAATTGTGCATTCATATTCCTTCCTTCCTTGTATTGGGAGG AAAAACTTACCCTGATTTGGTTCAATATATTCCAAGTTATGGCTTGCATTATGCTTCATATTTCATTTCTTTTGCCTTTCATTCTTGTGTTGGCAAGCTA CTTGATCTTTCTCAGTATGATGTATAGATATAGGCAATGGAAGATTATTTATCATGTTTTATTTGCTGGACTGCCGATTTTAGTTTCGTTCTCATGATTT CTTTGGCTATTTTGCTTCCGATTAGGTCTACTTCTTGTGGCTATGTGATAGAAAAGACAATACTGAAAAATGACAAAATTGAGAACTCAGTATTGTCTGT GCTAAGATTCCCTTCGGTGGAAATGATTATTAAAGAAAGGAAAAAGCATAGAAAACAGGAGGATATAAAAATACTTGGAAACAAAATTTCAATATAAACT CATTTTGAATGTAACAAGGCATCAAATCTCGTGCTAGGCATAAAAAACAGGAGGAGATAAAAATATTTGGAAATGATTATTGTTTGTTTGAGGATGAAAG CAGTGCTTTTGCTTTTACTTATTTTTTAGGGTGAGGAAATCTTCCATTCCGAGATTATTACTATCATGAATCATTAGTTTTGCCTAGACGGTGTCCATGT CATAGGATATGGTTGCAATAGAGGGAAGAATCATGTAGCAATAGAAGATTTGGCAACACTGACCACAGATCTTGGTTATGTATTTGAAAATGAGGGGTTA TGCTATTCAATAATTAGCAACATAATAACACAACTGTCTATTCTTTGCAATATGTCTTACGCAAGACTTGTGTTTCTTTTGCATTGAAATTAATGTTAAA ATTTGCTGTGGCCTGAAAAGGAACCCCAAGTTACTTTTGTGGGGCAAAAACACTTCGGGTGGAAGTTTTGATTTTTATTAGGCCTGGAGAGATGGTAGGA GTTGAGGATAAAGGTCAAGTGGGTTATTGATCAAAACACTTTCAAGTTTTACAATTAAGCGTAAAACATGAGGCACATAGTGGATGGTTAGGTGGAACAT TTTTAGTGGAAGTTTAAATGAATACTGTGAGTAGGATACTCTAATCATTCTAGTCATCTGAAAACAAGTTGAGCTGACCGTTGAGCCTAGAATTTGTGGT TTCCGTAGACATGATTATATTCTAGGGAAATATCACCTATGAGGATGACCATGATGCTTTTTTTGGGGGCCTTCACCATGATTTGAATCTAACAGGGCCG TATCTGCATGAATCCCGTCACCTACATGCGCTGAGAAGGGCAAGGGGTAATGGAGGTCGCTTTCTCAATACAAAGAAGCTTAAAGGTAACAGTTCTGATG GCACCATAAGCAACAACAATGGTGCACAACCCTTAACATTATCTGGCAGCTCATCTGCAGCTCAACATTTGGTTACCAACAACGGAATTCTCGTCTCATC AAATGATCAGTATGGTGCATCACAGTCCATAGTTGAGGACATGCATCAGGTGCAGAGTTTCACCATTGGTTACCATGATGGCAATGGTCTTTCATCACCA TACTATTCACAGTTAAATGGAAAAAAAGATGGAGACTGCTTTGGTAGAGAGAGGGAAAGCGTGCGCATGCATGGAGCCCCAAACGGGGCTGTAAAGTAAC ATTCCCTCGGAGTTGGTGGTTTTCTCTCTGGCATATATGGCAACAGTTAGGTACTTAATACTCTTGGTATATATTACTACCCATGTTCGAAAATAATCTA GTACCTTCGATTTTAGACAAATATAATCTGAGGTCACTAAATTACTCGCACTTGCAATGTACTCTCATTTCGCATAGTGGAGAAATCGAAAGATAAGGAT AAAGATGCAAAAAAATAAAATATGTCTTGGCTTGCTAAAGCACAAATAAAATGAAACTTATGGAGTAATGGTTTGCAGGTGAAGATGAAGGTCTCTGTCT AATCCAAAAGTTGGAGGAAACCACCCTTGTGTTACAGTAATTCTCAGGCAATTCATTCTTGGCTCAGTTACTTAGATCAAAGTGGTGAGATCAGCAAGGA AGATTCATGGTACAATCCACTCCTTGTTTGGTCTCCCCTTGTTTCCTATTCTCTTCATAAGTCCACTTGTTAAATGGATTAGAGAGAAAGCAAAAATAAC ATTGGTTTGTGAACTTTTTAAGTTGATATAATGGTGAAAGTTAATGTGTGAAACTGGATTTGGAGGTTATTGAACTGTAAACAAATTTGTATGACACATA CTGCACAATTGTGTAAACCTTCTTCCCTATTCTCTATTTGTCCTTAATTGTTGTGTGTAGGAGTTTTTCATGGATGTGTTTGTGCAACCATATGAAATTT GCTAGCCTATTATTGTTGTAGCTCTTGCATGCCCATAATCTTGATATTGTTGCATCCTATAAATGTGGCAAGTGTTGAAGTGAATGAATTTAAAGTTGGT GAATAAATCTGCC
• Tissue: pods
• Gene name: LI_gene_171138;
• Additional information: details;

Expression of Ll_transcript_415673

FPKM

• PAB: 0.3
• PNAB: 0.4
• PS1: 0.2
• PS2: 0.4
• PS3: 0.4
• PW1: 0
• PW2: 0.6
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_415673

• Blastp: Nuclear transcription factor Y subunit A-9 from Arabidopsis with 72.55% of identity
• Blastx: Nuclear transcription factor Y subunit A-5 from Arabidopsis with 55.56% of identity
• Eggnog: Nuclear transcription factor Y(COG5224)
• Kegg: Link to kegg annotations (AT3G20910)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449593.1)
• Pfam: CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B (PF02045.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;