Ll_transcript_414232

Id TrinityTRINITY_DN49658_c0_g2_i2
Name TranscriptLl_transcript_414232
SequenceCATCGTTGATTAGATTTTTCCATTTGCAAAATCAATAAAAAAAATTGTTCGTCAGTTTTTTTATAAATGCTATATGTCAATTATTTTATAAATATTATAT GGCAACTTTTTTCCGACCACTTTAAAGTGATTTTTTTTCCATAAATTATTTGTACAATCAGGTTTATAATTAAGTTGACACCCTTTTTATAGAAAAAGAA GAACAACACTTTTTATATAATTTATGTGGTGCAAAAGTAGTTTAGTTATTAATAAGTCTACGATCATTGGACTACTAATATAAGGTTTCATTGGATCTTT AATGTTAAAGATTCGATTTTTATGAGCGACATTTATTGAGAATGAGAGGATGTATAAAAATAGAAAAACTAGGTCAAGTACTCACTGTCACCAGTCACTA CGCAAATAAATTGAAAATGGTTCAAATATAGGAGTTATATGGGTTTTGATTCAGCGCGGGAATGCTTCTCCTTGTTCTCCACCGGTTCACCACTAAGCGC GTACCTCACTGCTACCCACTCCGTCATCGAGTCTCCACTACCGCACTTTCCCAGATCACGCGCCACCCCCTTTTCCTCCCACCCGCCAACCTTTTCTCCG CTCACAATGACAATGATACCTATCGCGTCAACCTCACCATCACCGCTCTTTCACGTGCCGGAAACATCGACGCCGCTCGTCAACTGTTCGATGAAACGAC TCACAAAGACATCGTCACCTGGAACTCCATGCTTACTGCCTACTGGCAAAACGGCCTTCTAGAAAATGCCATATCCCTCTTTCACTCCATGCCTGCCAAA AACGTCGTGTCGTATAACTCCATTGTCACTGCCTGCGTCCAAAATGACATGCTCGATGATGCTTTTAGTTACTTTGTCTCAATTCCGGAGAAGAATGCCG CATCATACAATGCCATGATCTCTGGTTTTGTGAAATTTGGGCTCATGAGGGAAGCACAGAAGCTGTTTGAAGAAATGCCTCGTCCGAATGTTGTTTCATA TACCACGATGATTGATGGGTATGCGAGGGTGGAAGGTGGGATTGGGCGTGCGAGGGTGCTATTTGATGCGATGCCTCACAGGAACGAGGTTACTTGGACA GTGATGATAAGTGGACTAGTAGAGAATGGACTTTGTGAGGAGGCATGGGAAGTGTTTGAGAGAATGCCGCAGAAGAATATTGTTGCTATGACTGCTATGA TCACGGGGTTTTGTAAAGAGGGAATGGTGGATAAGGCTAGGACTTTGTTTGAAGAGATTAGATGCAGGGATCGCGTTTCTTGGAATATAATGATCACAGG TTATGCCCAAAATGGGAGGGGGGAAGATGCACTGAATTTATTTTCACAGATGATCAGGGCCAGTATGCAACCAGATGACTTGACCTTTGTTTCACTTTTT ACTGCATGTGCTAGTCTTGCATCACTTGAAGAAGGGAGACAGGTTTATGGTCTTGTAATTAAGCATGGCTTCGATTCAGATTTGTCTGTGAGTAATGCTT TGGTCACTATGTACAGCAAATGTGGTGGAGTTGTTGATTCCGAGTTAGCTTTTGGACAAATTTCCCATCCAGATATCGTTTCTTGGAACACTATCATTGC TGCATTTTCACAGCATGGTCTCTATGACAAAGCACGCTCCTACTTTGACCAGATGCTAACAGTCGGAGTTCAACCTGATGGTATAACTTTTCTGGGTTTG TTATCTGCCTGTTGTCGTGCCGGAAAGGTTGATGAGAGCATGAGTCTGTTTAATTTGATGATCCATAATTATGATATTCCACCAAGGTCTGAACACTATG CTTGCTTAGTTGACATAATGAGTCGAGCTGGCCAGCTGCAGAGAGCATACAAAATAATCCAGGAGATGCCTTTAGAAGCAGATTCTAGCATCTGGAGCGC TTTGCTTGCAGCCTGTAGTGTTCATTTAAATGTGAAATTGGGAGAACTGGCAGCAAGAAAAATTTTAAATTTGGATCATCATAATTCTGGTGCTTATGTT ATGTTGTCTAATATATATGCTGCTGCCGGCAAGTGGAAGGATGTGAATAGAGTCAGGGTTTTGATGAAAGAGCAAGGAGTTAAGAAACAAACAGCTTATA GTTGGATGCAGATTGGAAACAAAATCCATTGTTTTGCTGGAGGGGATCCATCACATCCAAATACTAGTGATATCCATGTTGCTTTAGGGTGGATTACATT ACATATGAAGGTGAAGATTGACACTGAGGAAGTTTTCTTGTAGTGTTCATTTAAATGTGAAATTGGGGGACTGGCACCTAGAAAAATATTGAATTTGGAT TTTCAAAATTCCGGTGCTTATGTTGTCTAATATAATGCTGCTGGTTGCTAGTGGAAAAATGTCAATGGAGTTTAGGTTCGATTGAAAGAGCAAGTAGTTA AGAAACATTCAGCTTATTGTTGGGTTAATTTATGCCAACCATTCTGGCAAGGGAAGATACAGATTTTATTGAGAGTCAAGGGAAATCATTTTGAACTTGC AAGCCTCACAATTTGTGCCAAATGTAGCTTGAACTCCCAAAGATATAAAGCTGAGAATATGAAAATTCACGCTAAGTGTTCAATCTAATATTAAGAGGCT AAGAAAATCTGAATGGTTGACACCATTGATGTTGAATTGGTGTGGCCGATATTCAGTCCTGGGATTATTTCCAGCCATAATTACATATGCACTATGCTGA TATATGCCAGTTGAGATCTTCATAAAAGGTATATGACAAGGGAACATGGTTGGTCTCTTGCAAAGATGTGCCTAAGTACCTCAAAAGTGTAACTCTTCCT GTTATGTTTCCTTCTGGCGGAAGCTGTCAGGACCTTTTTGACAGTAACTGTAATGCTTACATGAGAGATGATATTAGTATTTTTACCAATGGGAATTCTG AAAATGGTGTTCAAACAGTTGATGATCCTGTGTGTCATCAGGCTGCTGAGGAGGTTTCTGATTTCCCTTTAGAGTGTTGCATGAGGATAGTGCCTCATGA TCAGAACACTGGAGCCTTCTTATTGCTGTATCGCAAAAAGTTTCTCATCTGCCAGGGACCATATGGGCTACAGTGTCCCCCAAAGTGGATGAGTCAACTA TGGCTATTGGATGCTAGAGGGGTGGGATGAGATTGATAGTGATGCTTACTACAATGGACTCTCAAAAACTACTTGAAAGGCTTTGAATACATCTAGACTC AGAAAAGGGTTATTCCGTGCACGTGGAAGAATCCTCTAATAATGTGGGAGGTGAAGTACAGCGTGTACCTGAGTTCAACGGTAAAAATGATGATGATGTG AAAGCTCCTATGAGTTCGAAGTGACTAGTTAACATATTTATTCATCAGTTGTAACAGATATTTAAGCTATTGCATTATAGAAATGATTTTTTCCTTCACC CATGATACGTTAGTGATAAATTTGCTTGTTTTTGTTAACCGACTACGTACTTCGGGATGGATTGGTGTGGTTCC BLAST
Tissuepods
Gene nameLI_gene_171156; 
Additional informationdetails; 

Expression of Ll_transcript_414232

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_414232

BlastpPentatricopeptide repeat-containing protein At4g02750 from Arabidopsis with 38.31% of identity
BlastxPentatricopeptide repeat-containing protein At4g02750 from Arabidopsis with 38.91% of identity
EggnogPentatricopeptide repeat-containing protein(ENOG410Z7Z7)
KeggLink to kegg annotations (AT4G02750)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019459705.1)
PfamPPR repeat (PF01535.19)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;